Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2158 |
Symbol | |
ID | 3835585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2505430 |
End bp | 2506965 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637826260 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_427245 |
Protein GI | 83593493 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTTG GGGATTTTTC TCGCTATCTC CCTGGTGGAC GGAGGGGTCT CTTCCCTATC TACTGTGGTG TTATAGAGGG CCGGCCCCGG AATGGCGGGC TGGTACGACC CCACAAAGCA GAAGAGTTCC CATCCCGAAT GACCGATGAG ACCCTGCCGT TTATCCTGCT GGTGGAAGAC ACCCCCGTTC AGGCAAGAAC CTATCTCGAC TACCTCGACG GCGGCCCTTG GACGATCGAG CATGTCGAGA CCGGCGCGGA AGCCTTGGCG GTTCTGGAGC GGCGCCCCCC CAGCCTGATG CTCCTTGATA TCCATTTGCC CGATATGGAT GGCATGGAGA TCCTGCGCCG GGTGCGGTCG CTGCCGCTGT CGATGGGGGT GGTGATGATC ACCTCGAACG CCTCGATCAG TCTGGCGGTG GCGGCGATGC AAGCCGGGGC TAATGATTTC CTGGTCAAGC CGTTCAGCCG CGACCGGCTG ATGGTCACCC TGCGCAACGT CATCGACAAT CAGCGTCTGT CGCGCGAGGT CGAGACCCTG CGCGAGAATC TGGGGATCGC CGCCTTCCAG GGCTTTGTCG GCTCCTCGGC GGCGATGCAG CGGGTTTACC GGCTGATCGA AGCCTCGGCC GCGAGCACGG CGACGGTTTT TATCACCGGG GAAAGCGGCA GCGGCAAGGA ACTGGCGGCC GAGGCCTTGC ACCGCTACGG GCCAAGGGTG AAAGGCCCCT TCGTCGCCCT GAATTGCGGC GCCATCCCGC GCGAGCTGAT GGAAAGCGAG GTCTTCGGCC ATGTGCGGGG GTCGTTCACC GGGGCGGTCT CCGACCGGGA CGGGGCGGCC GCCCAGGCCA ATGGCGGCAC CTTGTTCCTT GATGAGATCT GCGAGATGGA TCCCAATCTG CAGACCAAGC TGCTGCGCTT CCTGCAGACC GGCATGGTCC AGAAAGTCGG CGGCGACCGG CCCGAAAAGG TCGATGTGCG CATCGTCTGC GCGACAAACC GCGATCCTTT GGAAGAGGTC AAGGCCGGAC GCTTCCGCGA GGATCTGTAT TACCGTCTGC ACGTCATTCC CATCCGCCTG CCGGCCTTGC GCGACCGCGA GGGCGACGTT CTGGAAATCG CCGATCATTT CCTCGCCAGC ATTGCGACCG AGGAAAAGAA GAGCTTTCGC GGCTTTTCGC CGGCGGTGGC CCAGGCCCTG CTTGCCTATG ACTGGCCGGG AAACGTCCGC CAGTTGATCA ATGTCCTGCG CAATGTGGTG GTGCTTAACA ACGGGCCGGA AGTGACCTTG GGGATGCTGC CCCAGGCGAT CGCCGATGCC GATGGCGAGG CCATCGCGGG CGAGGCGGCC GAAGGCGAGT CTCCGGCGCT GTTTCGCCAG CAAGACATCG AACCGTTGTG GGTTGTGGAA AAACGCGCCG TCGAGCGGGC GATCGGCGCC TGCGGCGGCA ATATTCCCCG CGCCGCCGCC CTGTTGCGCG TCAGTCCCAG CACGCTGTAT CGCAAGAAGC AGGCCTGGGA AGAGGGCCGG CATTAA
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Protein sequence | MRLGDFSRYL PGGRRGLFPI YCGVIEGRPR NGGLVRPHKA EEFPSRMTDE TLPFILLVED TPVQARTYLD YLDGGPWTIE HVETGAEALA VLERRPPSLM LLDIHLPDMD GMEILRRVRS LPLSMGVVMI TSNASISLAV AAMQAGANDF LVKPFSRDRL MVTLRNVIDN QRLSREVETL RENLGIAAFQ GFVGSSAAMQ RVYRLIEASA ASTATVFITG ESGSGKELAA EALHRYGPRV KGPFVALNCG AIPRELMESE VFGHVRGSFT GAVSDRDGAA AQANGGTLFL DEICEMDPNL QTKLLRFLQT GMVQKVGGDR PEKVDVRIVC ATNRDPLEEV KAGRFREDLY YRLHVIPIRL PALRDREGDV LEIADHFLAS IATEEKKSFR GFSPAVAQAL LAYDWPGNVR QLINVLRNVV VLNNGPEVTL GMLPQAIADA DGEAIAGEAA EGESPALFRQ QDIEPLWVVE KRAVERAIGA CGGNIPRAAA LLRVSPSTLY RKKQAWEEGR H
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