| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2141 |
|---|
| Symbol | |
|---|
| ID | 3835568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2484773 |
|---|
| End bp | 2485735 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637826243 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_427228 |
|---|
| Protein GI | 83593476 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.648455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCATA GCCGGCCGTT GTCCCGTTTG CGGGCAAGCT TGATTTTGCT TCTGGTGTCC
TTCATCTGGG GGAGCGCCTT CGTCGCCCAG AAAACGGCCT TTGACGCGGT GGAGGGCGCC
ACCGCCCCCG CTTTGGGACC TCTGGCCTTC ACCGGTGCGC GCTTTCTTCT GGGCGCCCTG
GTCGTGCTGC CCTTCGCCCT GCGCGAAAAC CGTCAGGCGC GGAGCCGGGG GGCGCCAGGG
GCGGGGCTTT TGGCGATCTT TTGCGGGATC GGCGCGGTGC TGTTCGCCGC ATCCTTCACC
CAGCAGCTTG GCATCATCGG CACCTCGGTG ACCAATGCCG GATTTCTGAC GGCGCTTTAT
GTGCCGCTGG TGCCCGTCGT CGCCCTGGTG ATCTTCCGTC AATCGGTGCG CAAGATGATC
TGGCCGGGGG CGGCGGGCTG TCTGGCCGGG CTGTGGCTGC TGACCGGGGC GGCGACGAAC
GGCCTGTCGG CCCTGACCGC GGGCGATCTG TGGGTGCTGG TCGGCGCCCT GTTCTGGGCC
TTCCATGTGA CGGTGGTCGG GGTGATGGCG ACGCGCAGCG GCCGGCCGCT GACCCTGGCG
GCGGCGCAGT TCCTGACCTG CGGGGTTCTG GGCTGGGCCG GGGCCTTCGC CTTCGAGACG
CCGACCCTGG CCGGGATGGC CGCCATCGCC CCCGAGATCG CCTATGCGGG AATTCTCTCG
GTGGGGGTCG CCTTTACCCT GCAGGTGGTG GCCCAGCGCC ATACCCATCC GGCGGCGGCG
GCGATCATCT TGTCGATGGA GATGGTCTTC GCCTCGCTGG CCGCCGTCGT CGTTCTGGGC
GAGCGTCTGA GCGGCGTGCA ATGGCTTGGC GCCGGCTTGA TCCTGGCCAG CATCATCGCC
GTTGAAAGCG CCGCGGCCCT CGGCGATCGC CGTCGTGGCG CGGCGGGGGC CCTTACCCCC
TAA
|
|---|
| Protein sequence | MPHSRPLSRL RASLILLLVS FIWGSAFVAQ KTAFDAVEGA TAPALGPLAF TGARFLLGAL
VVLPFALREN RQARSRGAPG AGLLAIFCGI GAVLFAASFT QQLGIIGTSV TNAGFLTALY
VPLVPVVALV IFRQSVRKMI WPGAAGCLAG LWLLTGAATN GLSALTAGDL WVLVGALFWA
FHVTVVGVMA TRSGRPLTLA AAQFLTCGVL GWAGAFAFET PTLAGMAAIA PEIAYAGILS
VGVAFTLQVV AQRHTHPAAA AIILSMEMVF ASLAAVVVLG ERLSGVQWLG AGLILASIIA
VESAAALGDR RRGAAGALTP
|
|---|
| |