Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2113 |
Symbol | |
ID | 3835540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2451696 |
End bp | 2453102 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637826215 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_427200 |
Protein GI | 83593448 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00805596 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCATT TGCCGGAACT TCCGTCATCC GGCCGTGCCG GCTCTGGCGC GACGGAGCCG GCGGCGGGGC GCCTTCGGAT CCTGGCGATG CTTGCCGTTG TTTTCCTGCT GCTCGGCCTG CCCACCCAGG CCTTCGCCGG CTACGCCTCG ATCGTCGTTG ACGCGTCGAC GGGCCGGGTT TTGCAGGCGC GCAACGCCGA TATGCGCAAC TACCCCGCCT CGCTGACCAA GATGATGACC CTTTATCTGC TGTTCGAGGC GATCGACAAC GGCAAATACA CCCTGGAAAG CCGGCTGCCC GTGTCGAAAT GGGCGGCCAA TCAGGCGCCG TCCAAGCTGG GGGTGGCCGC GGGGACCGGC ATCAAGGTTG AACACGCGAT CAAGGCCCTG GTCACCAAAT CGGCCAATGA CGTGGCCGTG GTTATCGCCG AGGCCCTGGG CGGCACCGAA GCCAATTTCT CGGCCCTGAT GACCCGCAAG GCGGCGGCGC TCGGCATGAG CCAGACCACC TTTCGCAACG CCTCGGGCCT GCCCAACAAC GGCCAGATGA CCACCGCCCG TGACATGGCG GTGCTGTCGA TGGCGCTGAT CCGCCATTTT CCCAACCATT ACCGCTTCTT CGCCACCCAG TCCTTCCGCT TTGGCAACCG GACGATCACC ACCCATAACC ATGTCGTGCG CGAATACCCC GGGGCCGATG GCCTGAAGAC CGGCTATATC CAGGCCTCGG GCTTCAATGT CGCCTCCTCG GCGGTGCGCA ATGGCCGTCG TCTGGTCGCC GTGGTCTTCG GCGGACAGAC GGCGCGGGCC CGCGACACCC AGATGATGGC CCTGCTGGAC GAGGGCTTCG CCACCCTGGC CCGCGAAGGC GGCAGCGTCG TTCAGGCCAA GCGCAAACCC GATGCCATCG CCTCGATCAT CAAAGCCAAG GAACCGCCGG CCGCCGATAT GGGCTCGGCC GACGACGCGC CGATGCCCCC GGCCTACAAG CCCGGCTCGC TGACCGCCTC GGTCAGCGGC GGACGGACCC AGCAGATGGC CCTGGCCACC CCAATGCGCT CCTCGCCCGC TCCCTCGGCC AAGAGCGCCC CCGGCCCCCG GCCAACCCCC ATCGCCCGCA CGACGCCCGT CCCAAGCAAG GGCGCGGCCA AGGGGGACTG GGGCATTCAG GTTGGCGCCT ATGCCAAATC GGCGGCGGCG ACGGCGGCGG CCAATAAGGC CATCGGCCTT CTCGCCGCCG AGGCCCGCAG GCAGGTTTCG CCCGTCGTCG TTCAGCGCAA AAGCGGATCT GGGACCATTT ATCGGGCACG GCTGACCGGA TTGTCCAACG AGGCGGCGGC CCGCACCGCC TGCGCCACCC TCGTCCGCAA CGACCATTCC TGTCTGGTCG TCGCCCCGCA GAAATAG
|
Protein sequence | MNHLPELPSS GRAGSGATEP AAGRLRILAM LAVVFLLLGL PTQAFAGYAS IVVDASTGRV LQARNADMRN YPASLTKMMT LYLLFEAIDN GKYTLESRLP VSKWAANQAP SKLGVAAGTG IKVEHAIKAL VTKSANDVAV VIAEALGGTE ANFSALMTRK AAALGMSQTT FRNASGLPNN GQMTTARDMA VLSMALIRHF PNHYRFFATQ SFRFGNRTIT THNHVVREYP GADGLKTGYI QASGFNVASS AVRNGRRLVA VVFGGQTARA RDTQMMALLD EGFATLAREG GSVVQAKRKP DAIASIIKAK EPPAADMGSA DDAPMPPAYK PGSLTASVSG GRTQQMALAT PMRSSPAPSA KSAPGPRPTP IARTTPVPSK GAAKGDWGIQ VGAYAKSAAA TAAANKAIGL LAAEARRQVS PVVVQRKSGS GTIYRARLTG LSNEAAARTA CATLVRNDHS CLVVAPQK
|
| |