Gene Rru_A2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2098 
Symbol 
ID3835525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2428184 
End bp2432686 
Gene Length4503 bp 
Protein Length1500 aa 
Translation table11 
GC content71% 
IMG OID637826200 
Producthypothetical protein 
Protein accessionYP_427185 
Protein GI83593433 
COG category[S] Function unknown 
COG ID[COG2911] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAA CCGATCCTCT TCCTCCGCCC TCCCAGGCAC CGGGCGCGCA GCTGGCCCGT 
GGGCTGGCCT GGGGTGTTTC CGGGCTGCTT GCCCTGCTGG TGGTGATCGT TGGCGGGCTG
CTCGCCCTTG GTCAGACCGA TGGCGGCCGT TCGTGGCTGA AAGAGACGAT CGAAAGCGCG
GTCAGCGCGC CCGATGGTCT TGGCCTGCGC ATCGGCGCCC TGGAAGGCGC CTTGCCCGGC
CAGATCATCT TGCGCGACGT GGCGCTGAGC GATCCGCAAG GGGTGTGGTT GACCCTGGGG
CGGGCCGAGG TGCTGTGGTC GCCCCTGGCC CTGCTTGGCG GCCGCCTGTC GGTCGAGGCC
CTGCGGACCG AGGGGTTGGC GATCGCCCGC CCCCCCGCCT TGCCGTCCTC TCCCGAAGAC
CCGGACGCTG AGGGCTTTGA TTACCGCCTG CTCGCCCGGC TGCGCATCGG CGAGTTGGCC
GTTCCCGATC TGTCGCTGGG CGAGGCGCTG GTCGGCGAGG CGGTGCGCTT GGCCCTGACC
GGGCGGCTGG AGCCTGCGGG CGCGGCGATC TCCGGGGTGT GGCTGACGCT TGATCGCACC
GATGGCAAGC CGGCCCATCT CGGGCTGGTC GCCGAGGCCG GCGGCGCGCC GCTGGCCTTG
AGCGTCGATC TGGCCGCCCA TGAACCCGAA GGCGGGATCG TTGCCCGGCT GCTTGGCCTT
GAGGAGCGGA CGGCGCTGGC CCTCGATCTG AAAGGGCAGG GGCCTTTGGC CGACTGGCGG
GGGCGGATCA CCCTGCGGGC CGAGGATCTG CTGGCCGTCG AGGGCCCGCT GACCCTGGCG
CGCGACGAAA CGGGCGCCCT GGCCGCCGGC GCCGATCTTC GCTTTCGGCC TTTGGCCAAG
GCGCCGCCCC GGCTGAGGGC CGCCCTCGCC CCCGAGGCGA CGGTAAGCCT GCGCGCCCGC
GATGATGGGA ACGGCGGCAA GGCCCTTGAT CACCTTGGCG CCAGCGGGCC GGGCTGGACC
CTTACGGCCC AGGGCGCTGT GGGCAAGGAG GGCGCCCTTG ATCTCGTCCT TGATGGCGCT
CTGCACGGTG CCGGCGCCTT GGGCGGCCTC GTTCCCGACC TTGGGCTTGG CACGGCGCGG
GTGAGCCTTC GGGCCGGCGG CAGCCTGGAG GCTCCGACCG CTCGGGCCGA GGCGACGATC
AACGCCCTGG ACCTGCCCGG CGCCGTCACG GCGAAAACCC TGGCCCTCAC CGCCACCGCC
CAGCCCGAGG GGGCCAAAAC CGCCCTGTCG ATCACCGTCG GCGGCGAAGA TCTATCCCTG
ACCGCCGGTG GTCCGGCCCT GGCCGCCGCC CTGGGGCCTT CGCCGTCCCT GGCGATCAAG
GGCCTGTTCG ATGCCGAAGA AAGCCGGCTG ACCCTGTCGG ATCTCGTGCT GTCGGGGGCG
GCGGTCGGGC TGGGGGGAAC CGCCGATCTG GATCTTGATG GCGCGCAAGG CGGTGGTTTG
CTGGTTCCTG CCGCCGATCT GACCCTGACC TTGCCCGATC TGGCGCCGCT CGGCGACGCG
CTGGGCCGAC CGCTGGCCGG GCGGCTTGAC GCCCATCTGC TGGCCGAGGA GGTCTCGCTT
GAGCCGCGGC GCGGTCGCCT GCGCCTGGAG GCGCGCGGCA AGGATCTGGC GTTCGGCGGG
GGCCCCGCCG ACCGGGTCTT CGGCCCCGCC CCGGGGTTGA TCGCCGGGTT GAGCCTGGGC
GAGGACGGCG CCATCACCCT TGACTCGCTC GCCCTTGACG CGCCGGGGGC GACGCTGACG
GGGCAGGGCG GTCTGGCGAC GGACGGCACC CTGGATGCCA GTCTTGGCGC CTCGCTCTCC
GACCTTGGCG CGGTTCTTCC CGGCTTCAGC GGATCGCCCT CCCTGGAGAT CACCGCCTCG
GGGCCCTTGG CCGATGCGGC GCTGTCGCTG TCGCTGCGGG CCGATCGGCT GGCCGGGGCG
GGGATCGAGG CCCGGGCGCT TGATCTGACC CTGGCCATGG GCGGCCTGGG GAGCGAGCCG
GCCGGGGTGC TCGAAGGATC GGCCAAGCTT GGTGGCCAAC CGGTGACGCT GTCGCTGCCC
TTCGCCCTGA AAAACGATTT CGCCGCCCTG GAGCTGTGGC AGGCCGAGCT GGCCCTGGGA
TCGGCGCGGC TTGGCGGCGA TCTTGCGGTT GATCTGGAAA CAAAGCTGAG CGAAGGCGCG
CTGACCCTGG CCGTCCCCTC GCTGGCCGTG TTGAAGGCCG TGGGGGCGCC ACCGATGACC
GGTTCGCTCA CCGCCAAGGC CACCTTGGAT CGGGCGGGCG GGCGCCAGGG GGCGGTTGTC
AGCCTGCGCG CCCCGCAAGC CACCTTGGAC TCCCTGGCCG TCGGCCGCCT GACCCTGGAC
ATGAAACTGG CCGATGCCCT GGGCAAGCCG ACGCTCAAAG CCGAGGCCGG GGCGAGCGGC
GGAGCGGCGG GCGGCGTCGC CTGGAACCGG CTGAGCGTGA AGGCCGAGGG GGCTTTGAGC
GATCTGGCGC TGACCTTGGC CCTTGATGGG TCGATGGCGC GCGCCGTTTC GGCCAAGGCC
CCGCCCGCCA GATCCGCCCA GGCGCCGCCG GCCAAACTGA CCAAGACGCC CCCCGTCAGC
GGCCCGCGCG ATCCCTTGAG CGCCCGTCTC GTCGCCCGCC TTGCCATCAC CGAGGGGACG
ACGAAGCTGC GGCTGACGAC CCTGGACGCC AGCTTGCGCG ATCGCCGCCT GAGCCTGCTG
GCCCCGGCCA CCCTGACGAT GGCCGGCGAG GATATGATCC TTGATCGCCT GCGGCTGAGC
CTTGCCGGCG GCGAGCTGCA GGCGAGCGGG TCGCGGCGCG GCGGGGCGGT GAAGGCCACG
CTTGACGCCC GGGCGATCCC CCTTGCCTTG GCCGATCTGG TGGCACCCGA TTTGGGGCTT
GAGGGCCGGC TCGATGGCCG GGTGTCTTTA AGCGGATCGG CAAGCCGCCC AACCGGCGAG
GCGGCGATCA CGCTGTCGCG GCTGAAAACC AAGGCCGTCC CCGACCGCGC CCTGGAGGTC
CGCCTGGATG CGACGCTGGG CGCGCGCAGC CTGGATGGCA CGCTGAGCGT GGCCGGGTTC
GCCGGTCAGC CGCTGCGCGC CACCGCCAGC CTGCCGCGCG GCGCCGGACT GGCGATCGAC
CGCACCAAGC CTTTGACGGC GCGGGCCGAT TGGCGTGGCG ATGTGCGGGC CCTGATGGAT
TTCACCCCGC TGATCGACCA TCGTCTGAGT GGCGCCACGG TGATCGATAT CCTGGTGACG
GGGTCGATCG ATGCGCCGAT CGTCAGCGGC GGGGTTTCCC TGAAGAACGG CGCCTATGAG
AATTTGTCGA CCGGCACCGT GCTGCGCGAG ATCGCCCTGG CGCTGCGGGC CGATGGCGGG
CGCACCGTTA CCATCGATCT GGACGCCCGC GATGGCGGCA AGGGCCGGGT CAGCCTGAAG
GGGCGGGTTT TACTGGTCGA TTTGACCCGG CCGATCGGGC GCATCGATCT TGATATCACC
CAGGCGGTGG TGGTGCGCCG CGACGATGCC GTCGCCGAGA TCTCGGCCGA TCTGGCCATG
GTGCTGGCGG CCGATCAAAT GACCGTGAGC GGCACCGTCA CCACCGGCCC GGTGGAAATC
CGTCTGGTCG GCGGCGGCGG TCCCAGCATT GCCGAGCTTG ATGTGGTGGA GATCGGCGGC
AAGGGTCAGG CGACCAGCGC CACCCAGGCG GTGGCCGATC GCGAGGCCCT GCGAATGGCC
GCGCAAACGC CGATCCCGGT GCTGCTTGAT ATCACGGTCA GCTTGCCGCG CCGGGTTTAT
GTGCGCGGCC GGGGCGTCGA TTCCGAATGG GAAGGCAAGC TGAACGTGGG CGGAACGGCG
GCGGCGCCCA AGGTGGTGGG AACCATCACC ACGTTGCGCG GGCAGGCCGA TGTGCTTGGC
CGCACCTTCT CCCTGCGCAA GGGCGAGGTG CGGTTTGATG GCGGCATGCC GATCGATCCG
CTGCTTGATG TGGTCGCGGC CAATGATACG GGCGAGGTGG TGGCGCTGGT TTCGGTCAGC
GGCACCGCCT CGGACCCGCA AATCGGCTTT TCTTCCGAAC CGGCCCTGCC CAAGGACGAG
GTGATTTCGC AGATTTTGTT TGGCAAGACC TCGGGCGAAT TGTCGGCTTT CGAAGCCATC
CAACTGGCCG AGGCGGCCAG CCAATTGGCC GGTGTCGGCG GGGGCGGCGG GGTGATCCAG
TCGCTGCGGG CGATGACCGG GCTCGACGTG CTCAAGCTCG GCGAGGGGGC GACGGGCGGG
ACGACACTGG AAGCCGGGAC GTATCTGCGC GAGAATGTCT ATATTGGCGT CGAGCAGGGC
CTGGGACTGC AAGACAGCGC CATCGAGGTT CAGGTGGAGC TGACCCCGTC GATCAATCTG
GAAAGCAAGG TTGGGGCCAC CGGGGCCAGC GAGGCCGGTG TGTTCTGGAA GAAGGATTAT
TGA
 
Protein sequence
MATTDPLPPP SQAPGAQLAR GLAWGVSGLL ALLVVIVGGL LALGQTDGGR SWLKETIESA 
VSAPDGLGLR IGALEGALPG QIILRDVALS DPQGVWLTLG RAEVLWSPLA LLGGRLSVEA
LRTEGLAIAR PPALPSSPED PDAEGFDYRL LARLRIGELA VPDLSLGEAL VGEAVRLALT
GRLEPAGAAI SGVWLTLDRT DGKPAHLGLV AEAGGAPLAL SVDLAAHEPE GGIVARLLGL
EERTALALDL KGQGPLADWR GRITLRAEDL LAVEGPLTLA RDETGALAAG ADLRFRPLAK
APPRLRAALA PEATVSLRAR DDGNGGKALD HLGASGPGWT LTAQGAVGKE GALDLVLDGA
LHGAGALGGL VPDLGLGTAR VSLRAGGSLE APTARAEATI NALDLPGAVT AKTLALTATA
QPEGAKTALS ITVGGEDLSL TAGGPALAAA LGPSPSLAIK GLFDAEESRL TLSDLVLSGA
AVGLGGTADL DLDGAQGGGL LVPAADLTLT LPDLAPLGDA LGRPLAGRLD AHLLAEEVSL
EPRRGRLRLE ARGKDLAFGG GPADRVFGPA PGLIAGLSLG EDGAITLDSL ALDAPGATLT
GQGGLATDGT LDASLGASLS DLGAVLPGFS GSPSLEITAS GPLADAALSL SLRADRLAGA
GIEARALDLT LAMGGLGSEP AGVLEGSAKL GGQPVTLSLP FALKNDFAAL ELWQAELALG
SARLGGDLAV DLETKLSEGA LTLAVPSLAV LKAVGAPPMT GSLTAKATLD RAGGRQGAVV
SLRAPQATLD SLAVGRLTLD MKLADALGKP TLKAEAGASG GAAGGVAWNR LSVKAEGALS
DLALTLALDG SMARAVSAKA PPARSAQAPP AKLTKTPPVS GPRDPLSARL VARLAITEGT
TKLRLTTLDA SLRDRRLSLL APATLTMAGE DMILDRLRLS LAGGELQASG SRRGGAVKAT
LDARAIPLAL ADLVAPDLGL EGRLDGRVSL SGSASRPTGE AAITLSRLKT KAVPDRALEV
RLDATLGARS LDGTLSVAGF AGQPLRATAS LPRGAGLAID RTKPLTARAD WRGDVRALMD
FTPLIDHRLS GATVIDILVT GSIDAPIVSG GVSLKNGAYE NLSTGTVLRE IALALRADGG
RTVTIDLDAR DGGKGRVSLK GRVLLVDLTR PIGRIDLDIT QAVVVRRDDA VAEISADLAM
VLAADQMTVS GTVTTGPVEI RLVGGGGPSI AELDVVEIGG KGQATSATQA VADREALRMA
AQTPIPVLLD ITVSLPRRVY VRGRGVDSEW EGKLNVGGTA AAPKVVGTIT TLRGQADVLG
RTFSLRKGEV RFDGGMPIDP LLDVVAANDT GEVVALVSVS GTASDPQIGF SSEPALPKDE
VISQILFGKT SGELSAFEAI QLAEAASQLA GVGGGGGVIQ SLRAMTGLDV LKLGEGATGG
TTLEAGTYLR ENVYIGVEQG LGLQDSAIEV QVELTPSINL ESKVGATGAS EAGVFWKKDY