Gene Rru_A2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2024 
Symbol 
ID3835450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2337841 
End bp2338974 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content70% 
IMG OID637826125 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_427111 
Protein GI83593359 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAGA CGCCCCTTTC GCCCCCGCCG GTCGGCGGCC GTGTGGTCGT GGCCATGTCG 
GGCGGCGTCG ACAGCTCGGT GACCGCCGCC CTGCTCAAGG AACAGGGGCA CGATGTCGTC 
GGGCTGACCA TGCGGCTCTA CGACCACGGC AAGCCGCTGG GGCCGGGGGC GCGCACCTGC 
TGCGCCGGTC AGGATATCCA TGACGCCCGT CGCGTCGCCG ATCGCCTCGG CATCGCCCAT 
TACGTGCTCG ACTATGAAAG CCGCTTCCGC GAAGACGTGA TCGAGCCCTT CGCCGCGTCC 
TATGGCCGGG GCGAGACGCC GATTCCGTGC GTTTTGTGCA ATCAGACGGT CAAGTTCCGC 
GACCTGCTGG CGGCGGCCTT GGATCTGGGC GGCACAGCTT TGGCCACCGG CCATTACGTG 
CGCCGCCTGG ATGGCCCCGA AGGCCCCCGG CTCTATCGCG CCGTCGATCC CGGCCGCGAC 
CAAAGCTATT TCCTGTTCGC CACGACAAAA GGCCAGCTTG GCCGCCTGCT GTTTCCCTTG 
GGCGCCATGG CCAGCAAGGA CGAGACCCGG GCCATCGCCC GCCGTCTGGG GTTGGCGGTC 
GGCGACAAGC CCGACAGCCA GGATATCTGT TTCGTGCCCG ATGGCGATTA TGCCAAGGTC 
GTCGAGCGCC TGCGCCCCGG CGTGGTCGAA GCGGGCGAGA TCGTCGATCT GGACGGCACC 
GTGCTTGGTC ATCACCCCGG GCTGATCCAT TTCACCGTGG GCCAGCGCCG GGGCGTCGGC 
ATCGGCGGCT CGGCCGAGCC GTTGTATGTG ATCGCCTTGG ATACAGCGAC CCACCGGCTG 
GTCGTTGGTC CCCACGCCGC CCTGGCGCGG CGCGAGATCG CGGTCTCGGG CCTTAACTGG 
CTGGGCGAGG GCGAGGGGCC GGCCAGCGCC GGAACCCGGG CCCGCATCAA GATCCGCCAC 
GCCTCGCCGC CCTTTCCCGG CCAGATCTTC CCCGGCGCGG CGGCGGGCGA GGCCCGGGTG 
GTGCTTGACG AACCCGCCCA CGGCGTCGCC CCCGGCCAGG CCGCCGTCTT CTACGGCCTT 
GACGACAACG ACGCCCGGGT GCTGGGCGGC GGCTGGATCG GCGCCAGCCG CTAG
 
Protein sequence
MSQTPLSPPP VGGRVVVAMS GGVDSSVTAA LLKEQGHDVV GLTMRLYDHG KPLGPGARTC 
CAGQDIHDAR RVADRLGIAH YVLDYESRFR EDVIEPFAAS YGRGETPIPC VLCNQTVKFR 
DLLAAALDLG GTALATGHYV RRLDGPEGPR LYRAVDPGRD QSYFLFATTK GQLGRLLFPL 
GAMASKDETR AIARRLGLAV GDKPDSQDIC FVPDGDYAKV VERLRPGVVE AGEIVDLDGT 
VLGHHPGLIH FTVGQRRGVG IGGSAEPLYV IALDTATHRL VVGPHAALAR REIAVSGLNW 
LGEGEGPASA GTRARIKIRH ASPPFPGQIF PGAAAGEARV VLDEPAHGVA PGQAAVFYGL 
DDNDARVLGG GWIGASR