| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2011 |
|---|
| Symbol | |
|---|
| ID | 3835436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2324722 |
|---|
| End bp | 2326404 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637826111 |
|---|
| Product | ABC transporter component |
|---|
| Protein accession | YP_427098 |
|---|
| Protein GI | 83593346 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC CGACCCTTCC CTTGGCCTCC CCCCGCCTGA TTATCGACGA TCTGCGCGTC
GCCCTGCCTA AAAGCGCCGA CCGTCCCTTC GCCCTAAACG GCATTTCGCT GACCGTCGGC
GCCGACGAGA TCGTCTGTCT GGTCGGCGAA AGCGGCTCGG GCAAATCGAT GACCGCTGGC
GCCATCATGC GACTGCTTGG GCCGTCGACG CCGATCACCG GCGGGCGCAT CCTGCTTGAA
GGCGTGGATC TGCTCGGCCT GTCCGAAGCG GCCATGCGCG CCGTGCGCGG CGCCCGGGTG
GGGATGATCT TCCAAGAACC GATGACGGCG CTTAATCCGC TGCATACCAT CGGCGATCAG
ATCGCCGAGA CCTTCCGCAC CCATGGCACG CTTGGCCGCG CCGAGATCGA ACGCCGGGTG
CTTGATCTGC TGGCCGAGGT GCTGATCCCC GATCCGGTGG CGGCGGCCAA GGCCTATCCC
CACGAGCTGT CGGGGGGGCA GCGCCAGCGG GCGATGATCG CCATGGCCCT GGCCCTGGAG
CCGGCGCTGC TGATCGCCGA CGAGCCGACC ACGGCGCTTG ATGTCACCAC CCAGGCGCAG
ATCCTCGCCC TGATCCGCGA TCTGCAGCGG CGCAAGGGCA CGGGCGTGCT GTTCGTCACC
CATGATTTCG GCGTGGTGGC GGAAATCGCC GATCGCGTCG CCGTGATGCG CGGCGGCGAG
GTGGTCGAGG AGGGGGCGGC CGCCCAGGTC CTCAACCATC CGCTCCATCC CTATACCCGG
GCGCTGATCG CCGCCGTGCC GCCGCTGGTT CCGGCGCCGC CGCGGCCGGT CACCGGCCCG
CCGTTGCTGC GGGTCGAGGG CCTATCGAAG ACCTATCGCA GCGGCGGCTT CTTTGGCCGG
GGCGGACGGG TGACCCATGC GGTCAAGGAT GTGTCGTTCA CCCTGCGGCG CGGGGCGACG
CTGGGGATCG TCGGCGAAAG CGGCTCGGGC AAATCGACCC TGGCGCGCTG CGTCGTCCGC
CTGCTGACCA GCGAAAGCGG CTCCATCCAT CTCGACGACA TCGATCTATC GGCCCTGACC
GACAACGACT GGCACCGCGA AAGCCGGCGC ATCCAGATGG TGTTCCAGGA CCCCTATGGC
TCGCTCAATC CCCGGCGGCG GGTTGGCGAG CTGGTGGCCC AGGGGCCGAT CGTGCGCGGG
GCGCCGCGCC GCGAGGTCGA AGCCCGGGTG CGCGAGCTGT TCGCCCTGGT CGGCCTCGAC
CCCAAGGCGG TGGACCGCTT CCCCCACGAG TTCTCCGGCG GGCAGCGCCA GCGCATCGGT
CTGGCCCGCG CCCTGGCCCT TGATCCCGAT GTGCTGGTCG CCGACGAGGC GGTCTCGGCC
CTTGACGTCT CGGTGCAGGC CCAGGTTCTG GCCCTGCTTG CCGATCTGCG CGAGCGGCTG
AATTTGTCGG TGCTGTTCAT CACCCATGAT CTGCGGGTGG CCGGACAGAT CGCCGATGAT
ATCCTGGTGA TGAAGGATGG CGCCGTGGTC GAAGCCGGTC CGACCGCCCG GGTGTTCGCC
GATCCCCATC ACCCCTATAC GAAAACCCTG ATGGCGGCGG TGCCCGGACG GGCCTGGATG
CCCCCGGTCA CGGCGGCCGA CCGGCGGGCC GACGACCCGG CGCCCGTTCC CCTTGGTCTT
TAG
|
|---|
| Protein sequence | MTAPTLPLAS PRLIIDDLRV ALPKSADRPF ALNGISLTVG ADEIVCLVGE SGSGKSMTAG
AIMRLLGPST PITGGRILLE GVDLLGLSEA AMRAVRGARV GMIFQEPMTA LNPLHTIGDQ
IAETFRTHGT LGRAEIERRV LDLLAEVLIP DPVAAAKAYP HELSGGQRQR AMIAMALALE
PALLIADEPT TALDVTTQAQ ILALIRDLQR RKGTGVLFVT HDFGVVAEIA DRVAVMRGGE
VVEEGAAAQV LNHPLHPYTR ALIAAVPPLV PAPPRPVTGP PLLRVEGLSK TYRSGGFFGR
GGRVTHAVKD VSFTLRRGAT LGIVGESGSG KSTLARCVVR LLTSESGSIH LDDIDLSALT
DNDWHRESRR IQMVFQDPYG SLNPRRRVGE LVAQGPIVRG APRREVEARV RELFALVGLD
PKAVDRFPHE FSGGQRQRIG LARALALDPD VLVADEAVSA LDVSVQAQVL ALLADLRERL
NLSVLFITHD LRVAGQIADD ILVMKDGAVV EAGPTARVFA DPHHPYTKTL MAAVPGRAWM
PPVTAADRRA DDPAPVPLGL
|
|---|
| |