Gene Rru_A2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2000 
Symbol 
ID3835425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp2309933 
End bp2310403 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID637826100 
Producthypothetical protein 
Protein accessionYP_427087 
Protein GI83593335 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3435] Gentisate 1,2-dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATT CGAACGACGA CCGGCCCTTT CGGCCCTTTC AATCCCAGTA TCGCTGGCCG 
GGCGTCGATC TGCTCGCCTA TAAGGAGGAA GGCAGCGCGC CCTTTCGCTC GGTCACCCGT 
CAGGTGCTGT TCTCGGGCAA TGGATTGACC GGCGAGCTGC GCTATTTCGA GGTTGGGCCG 
GGCGGTCATT CGACCCTGGA GCGCCACCAG CACGCCCATG GGGTGATGAT CCTCAAGGGC 
CGGGGCCATG CCATGGTCGG CCGGGCGGTG AGCGCGGTCG CGCCTTATGA TCTGGTGACG 
ATTCCGGGGT GGAGCTGGCA CCAGTTCCGC GCCCCAGCCG ACGAAGCCTT GGGCTTCCTA 
TGCATGGTCA ACGCCGAACG CGACAAGCCC CAGCTGCCGA CCGAGGCCGA TCTGGCGATG 
CTGCGCGCCG ACGACGCGGT CGCGGCCTTC CTTGACGGGC TGGCGGGATA A
 
Protein sequence
MSDSNDDRPF RPFQSQYRWP GVDLLAYKEE GSAPFRSVTR QVLFSGNGLT GELRYFEVGP 
GGHSTLERHQ HAHGVMILKG RGHAMVGRAV SAVAPYDLVT IPGWSWHQFR APADEALGFL 
CMVNAERDKP QLPTEADLAM LRADDAVAAF LDGLAG