Gene Rru_A1982 details

Gene Information

• Locus tag: Rru_A1982
• ID: 3835406
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 2293889
• End bp: 2294389
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637826081
• Product: SEC-C domain-containing protein
• Protein accession: YP_427069
• Protein GI: 83593317
• COG category: [S] Function unknown
• COG ID: [COG3012] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCCAGG CGACCGACTG CCCCTGCGGC TCGGGCAAGG CGCTCAGCGC CTGCTGTGGC 
CCCTTGATCG ATGGTCTTGC CGTGGCGCCC ACCGCCGAAG CCATGATGCG CTCGCGTTAT 
GTCGCCTTCA GCCAGGGCAA CGCCGAGTAT CTGCGCGCCA CTTTGGCGAC CGGCCACGAC 
GATGATTTCG ATCCCGAGGA AATCCGCGCC ACCGCCAAGA ACGCCCATTG GCAGGGCCTG 
GAAATCCGCA AGGTGACCGA GGGCGGCGCC GACGACGACG AGGGAACGGT CGAATTCATC 
GCCCGTTTCA AGATCGGCGG CCGGTCGGTG CTGCACCACG AACGCTCGCA TTTCCTGCGC 
GAGGACGGTC AGTGGCGTTG CGCCGATGCC GAGATGAACC CGACCGAGCC GCCGCGCTCC 
GTCGTCAAGA TCGGCCGCAA TGATCCCTGT CCCTGCGGGT CGGGCAAGAA GTACAAGAAG 
TGCTGCGGGG TCGCGGCCTA A 

 

Protein sequence

MTQATDCPCG SGKALSACCG PLIDGLAVAP TAEAMMRSRY VAFSQGNAEY LRATLATGHD 
DDFDPEEIRA TAKNAHWQGL EIRKVTEGGA DDDEGTVEFI ARFKIGGRSV LHHERSHFLR 
EDGQWRCADA EMNPTEPPRS VVKIGRNDPC PCGSGKKYKK CCGVAA