| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1979 |
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| Symbol | |
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| ID | 3835403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2290185 |
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| End bp | 2291543 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637826078 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_427066 |
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| Protein GI | 83593314 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.436663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGA GTACCAAATA CCTGCTGTCC GAAGATCGGT TGCCCAAGGC CTGGTACAAT
CTGGCCGCCG ATCTGCCCGT GCCCCTGCCG CCGCCGCTCA ACCCCGGAAC GCTGAAGCCA
TTGGTCGCCG ATGATCTGGC GCCGATCTTC CCGCGCGCGG TGATCGAGCA GGAGATGAGC
GCCGAGCGCT GGATCGATAT CCCCGAACCG GTGCGCGAGG TGTATCGCCT GTGGCGGCCG
TCGCCGCTGA TCCGCGCCCG GCGGCTCGAG CGCGCCCTTG ATACCCCCGC CCATATCTAC
TTCAAATACG AAGGCGTGAG CCCGGCGGGC AGCCATAAGC CCAATACCTC GGTCCCCCAG
GCGTTCTATA ACCAGCAAGA GGGCGTCAAG AAGCTGGCGA CCGAAACCGG CGCCGGCCAA
TGGGGCTGTT CGCTGGCCTT CGCCGGATCG CTGTTCGGCC TGGAAGTCCA AGTGTTCATG
GTCAAGGTGT CGTTCAATCA GAAGCCCTAT CGCCGGGCGC TGATGGAAAC CTATGGCGCC
ACCTGCATTC CCAGCCCCTC GCCGCTGACC GAGGCCGGCC GCGCCATTCT GGCCCGCGAC
CCGGAGTCCA ACGGCTCGCT CGGCATCGCC ATTTCCGAGG CGGTCGAGGT CGCCATCGCC
CATGACGACA CCAAATACGC CCTGGGCAGC GTCCTCAATC ACGTCTGCCT GCATCAGACG
GTGATCGGCG AAGAAGCGCT GTTACAGATG GAGATGGCCG GCGACGAGCC CGATGTGGTG
ATCGCCTGCA CCGGCGGCGG CTCGAACTTC GCCGGACTGG CCTTCCCCTA TATCCGCGAG
AAGATCAAGG GGCGGTCGAT CCGCATCGTC GGCGTCGAAC CCCATTCCTG CCCGACCCTG
ACCAAGGGCC GCTATGCCTA TGATTTCGGC GATACGGCCA AGCTGACGCC CTTGATGAAG
ATGCATACCC TGGGCGCCAC CTTCATGCCG CCCGGCTCGC ATTCCGGCGG CCTGCGCTAC
CACGGCATGT CGCCGATGGT CAGCCACGTC AAGGAACTGG GCCTGATGGA GGCGCGGTCC
TATCACCAGA CCGAATGCTT CGCCGCCGCC CTGCAATTCG CCCGCAACGA AGGCATCGTT
CCCGCACCCG AGTCTTCGCA TGCGGTTAAG GCCGCCATCG ACGAAGCCTT GCTGGCCAAG
GCCGAAGGCA AGGCGCGGAC GATCCTGTTC AATCTGTCGG GCCACGGCCA TTTCGACATG
CAGGCCTATA CGGATTATTT GGCCGGAAAG CTCAAGGACC GGGTGTTCGA CGACAGTCTG
CTTGACGAAG CCTTGGCCGA TCTGCCGGTT ATCGACTGA
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| Protein sequence | MTESTKYLLS EDRLPKAWYN LAADLPVPLP PPLNPGTLKP LVADDLAPIF PRAVIEQEMS
AERWIDIPEP VREVYRLWRP SPLIRARRLE RALDTPAHIY FKYEGVSPAG SHKPNTSVPQ
AFYNQQEGVK KLATETGAGQ WGCSLAFAGS LFGLEVQVFM VKVSFNQKPY RRALMETYGA
TCIPSPSPLT EAGRAILARD PESNGSLGIA ISEAVEVAIA HDDTKYALGS VLNHVCLHQT
VIGEEALLQM EMAGDEPDVV IACTGGGSNF AGLAFPYIRE KIKGRSIRIV GVEPHSCPTL
TKGRYAYDFG DTAKLTPLMK MHTLGATFMP PGSHSGGLRY HGMSPMVSHV KELGLMEARS
YHQTECFAAA LQFARNEGIV PAPESSHAVK AAIDEALLAK AEGKARTILF NLSGHGHFDM
QAYTDYLAGK LKDRVFDDSL LDEALADLPV ID
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