| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1976 |
|---|
| Symbol | |
|---|
| ID | 3835400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2286031 |
|---|
| End bp | 2287344 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637826075 |
|---|
| Product | phenylacetate-CoA ligase |
|---|
| Protein accession | YP_427063 |
|---|
| Protein GI | 83593311 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATATTT CCAACGATGG CTATATGTTC GCGAAAGATC GCGAGACGAT GCCGCGCGAG
CACCTCGCCG GCCTGCAATT CGCCCGTCTC AAGGACACCC TGACCCGGGT TTACGCCAGC
GTTCCCCATT ACCGACGGGC TTTCGAGGCC AAGGGGGTCT CGCCCGAGGA TCTGAACACG
CTTGAGGATC TGGCGCGGTT CCCCTTCACG GTGAAGGACG ACCTGCGCGA GGCCTATCCC
TTCAAGCTGT TCGCCGTGCC GCGCGATCAG GTGGTGCGGC TCCACGCCTC GTCGGGCACC
ACCGGCTTGC CCACGGTGGT CGGCTATACC CGCGCCGATA TCGACACCTG GGCCGGGCTG
ATGGCGCGCT GCATCGCCTG CGCCGGTGGC CGGCCGGGCG ATATCTTGCA TAACGCCTAT
GGCTACGGCC TGTTCACCGG CGGTCTGGGC GCCCATTACG GCGCCGAGGC CCTGGGTTGT
TCCGTGGTGC CGATGTCGGG GGGCAATACG GAAAAGCAGA TCCTGCTGCT CAAGGATTTC
GGCGCCAATG TCGTGTGCTG CACGCCATCC TACGCGATCA ATCTCGCCGA GGAGGCCGAG
CGGCGGGGCG TTGATCTCAA GGGCGGACCC TTGCGGGTGG GGCTGTTTGG CGCCGAGCCC
TGGTGCCAGG GCATGCGCCT GGAACTCGAG GAGCGCCTTG GTATCCGCGC CATGGACGTG
TACGGCCTAA GCGAGATCAT GGGGCCGGGC GTCGCGGTCG AATGCGCCGA GCAGGCCGGT
CTGCATGGCT GGGAGGATCA TTTCCTGTTC GAGGTCATCG ACCCGGAAAC CCTGCGGCCG
CTGCCCGTGG GCGAGCAGGG GGAGTTGGTC ATCACCACCC TGACCAAGCA GGCCCTGCCG
ATGATCCGCT ACCGCACCCG CGATATCACC CGGCTGTCGG ACGAGCCTTG CCCCTGCGGC
CGCACCCACC GGCGCATCCT GCGGGTGACC GGGCGCAACG ACGACATGAT GATCATCCGC
GGGGTCAATG TGTATCCCTC GCAGCTGGAA GCGGTGATGG TCGGCCGCCC GGGCCTCGCC
CCCCATTACC AGCTGATCTT GCAACGCGAC GGCTCGCTGG ACACCCTGAC CGTCGAGGTC
GAGGCCCGCG AGGGGCTGCC CTGCGACGAC TACGACGCCA TCGGCCGCGA CCTGGGCCGC
CATATCAAAT CCCTGGTCGG CGTCACCGCC CGCATCATCG TGGTGCCCCC GGGCCAGATC
GCCCGCTCGC AAGGCAAGGC CGCCCGGGTG CGCGATCTGC GCAAACAGTA TTAG
|
|---|
| Protein sequence | MHISNDGYMF AKDRETMPRE HLAGLQFARL KDTLTRVYAS VPHYRRAFEA KGVSPEDLNT
LEDLARFPFT VKDDLREAYP FKLFAVPRDQ VVRLHASSGT TGLPTVVGYT RADIDTWAGL
MARCIACAGG RPGDILHNAY GYGLFTGGLG AHYGAEALGC SVVPMSGGNT EKQILLLKDF
GANVVCCTPS YAINLAEEAE RRGVDLKGGP LRVGLFGAEP WCQGMRLELE ERLGIRAMDV
YGLSEIMGPG VAVECAEQAG LHGWEDHFLF EVIDPETLRP LPVGEQGELV ITTLTKQALP
MIRYRTRDIT RLSDEPCPCG RTHRRILRVT GRNDDMMIIR GVNVYPSQLE AVMVGRPGLA
PHYQLILQRD GSLDTLTVEV EAREGLPCDD YDAIGRDLGR HIKSLVGVTA RIIVVPPGQI
ARSQGKAARV RDLRKQY
|
|---|
| |