Gene Rru_A1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1973 
Symbol 
ID3835397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2282977 
End bp2284002 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content68% 
IMG OID637826072 
ProductLacI family transcription regulator 
Protein accessionYP_427060 
Protein GI83593308 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.768247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACA ATGATGCGAA ACCGATGACC GTCAGCATCA AGGATGTCGC CCGCCATGCC 
GGGGTCTCGC CCTCGACGGT GTCGCGCGCC CTGGGTCGCG GGCCGATCAG CGAGCCTTTG
CGCCAGCAAG TCGAGGCCGC CGTCCGTGAA ACCGGGTATC GGCCCAATCT TTCGGCGCGG
CGCTTGCGCT CACGCGAGAG CGGAACCGTC GGCCTGATCC TGGCCGATAT CGGTAACCCC
TTTTTCACCG CCCTGACGCG GGCGGTGGAA GACGCCGCCT ATCAGGCGGG GCTGCGGGTG
ATCTTGTGCA ATACCGGCGA AGACGCCGAG CGCGAGGCGA TGTATCTGCG GCTGATGCAG
GAAGAGCGGG TGAGCGGGGT GATCTTCGCC CCGACCCTGG CCTATCTCGA CCACCCGCCG
CAGTCCCCCC TGGATTTTCC CGTCGTTCTT GTCGACCGCG CCGGGCCCCA GGGCCTTTAT
GACAGCGTCG TGCTCGACAA CGAGGCCGCC TGCGCCACCC TGGTCGATCA TTTCCACGCT
CGCGGCTATC GGCGCATCAA TGGGCTGTTT GGCAAGACCA GCGCCACCGG CGTCGAACGC
CGCCGGGGCT ATGACGACAC CATGCGGGCT TACGGCCTGG AGCCCAAAGC CTGCGCCATC
GCCCCCCATG CCGAAGCCGC CGAGGTCGCC GTCAGCCGCT GGCTGAGCGA GCCCGAGCCG
CCCGAGGCGA TCGTCGCCAG CAACAGCCTG CTGCTGATCG GCGCCCTGCG CGCCGTCCGC
CGCGCCTGGC TGCGCCTGCC CGACGACATC GCCCTCGCCG GCTTCGATAA CGAGCTGTGG
ACCGAACTGG TCGAACCGGG AATGACGGTG ATCGAACAGC CGATCGAAGC CATCGGCCGC
GCCGCCATGT CCCTGCTGCG CGACCGCATG GCCGATCCCA CCCTGCCCCC CCGGCAGATC
GTGCTCAAGG GCCGGGCGAT CATCCGCGGC TCAAGCGCCC CCGCCTTGGA CGAGCGGAGT
TTTTAG
 
Protein sequence
MDDNDAKPMT VSIKDVARHA GVSPSTVSRA LGRGPISEPL RQQVEAAVRE TGYRPNLSAR 
RLRSRESGTV GLILADIGNP FFTALTRAVE DAAYQAGLRV ILCNTGEDAE REAMYLRLMQ
EERVSGVIFA PTLAYLDHPP QSPLDFPVVL VDRAGPQGLY DSVVLDNEAA CATLVDHFHA
RGYRRINGLF GKTSATGVER RRGYDDTMRA YGLEPKACAI APHAEAAEVA VSRWLSEPEP
PEAIVASNSL LLIGALRAVR RAWLRLPDDI ALAGFDNELW TELVEPGMTV IEQPIEAIGR
AAMSLLRDRM ADPTLPPRQI VLKGRAIIRG SSAPALDERS F