Gene Rru_A1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1971 
Symbol 
ID3835395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2279258 
End bp2280241 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content69% 
IMG OID637826070 
ProductPfkB 
Protein accessionYP_427058 
Protein GI83593306 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 
TIGRFAM ID[TIGR03168] hexose kinase, 1-phosphofructokinase family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.808112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCG ATCCCTCCGC CTTGCCCTCC GCCTTGATTG TCCGCACCCT GACCCTTAAC 
CCCGCCATCG ATCAGACCAT CACCCTTGAG GCCCTGACCC CGGGAACCGT CCACCGCGCT
CGCGCCACCC GCTCGGACGC CGGCGGCAAG GGGATCAACG TCGCCGCCTG TCTGGCCGAT
TGGGGCGAGA GCGTCGCCGT CTATGGCGTT CTGGGGCGGG ATAATTCCGG CCCCTTCGAC
GCCCTGTTCG CCGCCAAGGG CATGATCGAC CGCTTCGTGC GCATCCCCGG CGAGACCCGC
ACCAACATCA AGCTGGTCAG CAGCGGCGGC GGGCCGACCA CCGATATCAA TCTGCCGGGG
TTGGAAATCG ATCGCCCCTG CCTTGAGCGG GTGGCGACGG CCTTATTGGC CGATCTGGCG
CCGGGCACGC CGGTGGTGCT GTCGGGTAGC CTGCCGCGCG GGCTTGATGA CAAGACCTAT
GTCGGACTGG TCGGGGCTTT GCGCGAACGC GGCGCGAAAG TGGTGCTTGA TGTCAGCGGC
TGGCCCCTGA CCCGCGCCCT GGAAGCTCCG GCCGATCACC TGCCCCATTG CGTCAAGCCC
AACCGCCACG AGCTGGAATC CTGGGCCGGC CGCGCCTTGC CGACGCTGGC CGATGTTCAA
GAGGCCGCCC ATGGCTTGCG CGGGAAGGGG GTTGCCCGGG TGGTGGTGTC GCTGGGCTCG
GATGGGGCGT TGTTTGTCTC CGACGAGGGG GCCCTGCACG CCAAATTGCC GGCGATGACG
GCGCTGAGCA CGGTCGGGGC CGGCGACGCC ATGGTCGCCG GTCTGGTCGC GGCGCTGCGC
CAGGACCTGG GTCTTGAAGA CACCGCCCGG CTGGCGACGG CCTTCGCCGC GGCCAAGCTT
CGCCATGTCG GCGCCCAATT ACCCGGACGC GACGTCGTTC TCGCCCTGGC CGGGCAAACC
CATATCGCGC GTCTTCAAGC CTAA
 
Protein sequence
MSSDPSALPS ALIVRTLTLN PAIDQTITLE ALTPGTVHRA RATRSDAGGK GINVAACLAD 
WGESVAVYGV LGRDNSGPFD ALFAAKGMID RFVRIPGETR TNIKLVSSGG GPTTDINLPG
LEIDRPCLER VATALLADLA PGTPVVLSGS LPRGLDDKTY VGLVGALRER GAKVVLDVSG
WPLTRALEAP ADHLPHCVKP NRHELESWAG RALPTLADVQ EAAHGLRGKG VARVVVSLGS
DGALFVSDEG ALHAKLPAMT ALSTVGAGDA MVAGLVAALR QDLGLEDTAR LATAFAAAKL
RHVGAQLPGR DVVLALAGQT HIARLQA