Gene Rru_A1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1961 
Symbol 
ID3835385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp2269075 
End bp2269716 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content63% 
IMG OID637826060 
ProductTetR family transcriptional regulator 
Protein accessionYP_427048 
Protein GI83593296 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.310052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC ATCGAAAACC TCTGATTACT CAGCGAAAAC AGCCCCGTCA GGCCCGCTCA 
AACGATCTGG TTGCCGCCAT CCTGGAGGCG GCGGCTCAGG TTTTGACCAG GGACGGCGCT 
CATCGTTTCA CCACCGCCCG GGTGGCCGAG AAAGCGGGAG TCAGCGTCGG ATCGCTCTAT 
CAGTATTTCC CTAACAAGGC GGCGATCCTC TTCCGCCTTC AGAGCGACGA ATGGCGGCAG 
ACATCCGAGA TGCTGCACAC CACTCTGGGG AATGCGGAGA AACCGCCGCC CGAGCGACTG 
CGTACCCTGG TTCACGCTTT CATTCGTTCG GAATGTGAGG AGGCAGCGAC GCGCCTTGCG 
CTCAGCGATG CCGCCCCCCT TTATCGTGAT GCGCCCGAAG CGCGGCAAAC GCGTGAGGCG 
GCACAGCGCA TGGTCCAGAC GTTTCTCCGC GAGGCGCTGC CGGAGGCCGC CGAGTCCACG 
CGGGCTTTGG CTGGCGATCT GATCACCATG ACGCTGGCCT CCGTGGGAAA GCAGTTTTCG 
AGCGCGCCCC GCACCCCCGC CGAAATCTCC GCTTACGCCG ATGCGCTGGC TGACATGTTC 
TGCGCCTATC TGGGACTCCT GAACGGTCGC GACAAAGGCT GA
 
Protein sequence
MTDHRKPLIT QRKQPRQARS NDLVAAILEA AAQVLTRDGA HRFTTARVAE KAGVSVGSLY 
QYFPNKAAIL FRLQSDEWRQ TSEMLHTTLG NAEKPPPERL RTLVHAFIRS ECEEAATRLA 
LSDAAPLYRD APEARQTREA AQRMVQTFLR EALPEAAEST RALAGDLITM TLASVGKQFS 
SAPRTPAEIS AYADALADMF CAYLGLLNGR DKG