| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1951 |
|---|
| Symbol | |
|---|
| ID | 3835375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2260062 |
|---|
| End bp | 2260886 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637826050 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_427038 |
|---|
| Protein GI | 83593286 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0409973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCTCT CACGATCCGC CGTCGCTGTT TTCGACCCCG ATCTCACGGA TCGGCCGGCG
GTCGCCCGTC AGCTCGACTT CGCCGACCAC CAAGCGGAAG TGCCGATGCA TGAGCATCGC
AAAGGCCAGT TGATCCTCGC GCTGCATGGG GCGGTCACCT GCACGGCGGA CAACGAGATC
TGGATCGTGC CGCCCAACTG CGCAGTCTGG ATACCGGGCG GGGTACCCCA TAGCGCCCGG
GCGACGGCGA ATGCCCGGCT TACCTATCTC TTTGTGGAGC CGGGGGCGGC GAAGCTACCC
GAGGAGTGTT GTACCCTGTC GATCTCGCCC ATGATCCGGG AAATGGTCGA CCGGTTGGCG
CGCGAGCCTG CCGACTATCC TTCGCATGGC CATGCGGCCC GGCTGGCGAG GGTGGCTCTT
GATGAACTGG TGGACATGCC GCGCGAGCGC TTCAACTTGC CTATCTCCGG CAATGCGAAG
ATCCGCGCGA TAGCCGACGC TCTGACGGTC GACCCGTCCG ACCGCAGCAC CTTGGCCGAA
TGGGCCAAGC GCGTGGCGAT GAGCGAGAGG TCGCTGGCCC GTTTGATGAT CCGGGAGACG
GGCTTGACCT TCGGACGCTG GCGGCAGCAA TTGCACCTTG TCGTTGCGCT TCGCCAACTG
GCCGGTGGGG CGTCGGTGCA CACCGTTGCC GCCGAGCTGG GCTACGAGTC GGTCAACGCC
TTCATCACGA TGTTCAAGAA GGCGCTGGGG AGTACGCCCG CGCAGTATTT CGTAGAGCGC
AGGGCGCTAC CGCCTTCGAT CCTAAAAGAA GGACGGCATG AGTGA
|
|---|
| Protein sequence | MVLSRSAVAV FDPDLTDRPA VARQLDFADH QAEVPMHEHR KGQLILALHG AVTCTADNEI
WIVPPNCAVW IPGGVPHSAR ATANARLTYL FVEPGAAKLP EECCTLSISP MIREMVDRLA
REPADYPSHG HAARLARVAL DELVDMPRER FNLPISGNAK IRAIADALTV DPSDRSTLAE
WAKRVAMSER SLARLMIRET GLTFGRWRQQ LHLVVALRQL AGGASVHTVA AELGYESVNA
FITMFKKALG STPAQYFVER RALPPSILKE GRHE
|
|---|
| |