| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1945 |
|---|
| Symbol | |
|---|
| ID | 3835369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2253749 |
|---|
| End bp | 2254432 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637826044 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_427032 |
|---|
| Protein GI | 83593280 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCA TTCTTATCTC CGGGGCCAAT CGTGGCCTGG GCCTGGAATT CGCCCGGCAG
TATCGCCAGG AAGGGCATCG GGTGATCGGC ACCTGCCGCG ATCCCGGCAA GGCTGGCGAT
CTTCTGGCCC TTGGCGCCGA GGTCCTGCCC CTTGACGTGG CCGATCTGGC CGCCGTCGCC
GGCTTCGGCG CGGTGGTGGG GGACCAGCCC GTCGATCTGT TCATCAACAA TGCCGGCGTT
TATGGCGGAC GCCACAGCGA ACAGGATCTG GGCGAGGTCG ACAGCCGCGT TTGGCTTGAA
ACCCTGGTGG TCAATACCAT CGCTCCGCTC AAGCTGACCG AGGCGATCTT GCCCAATCTC
GAGCGGGCCG AGGCGGCGAA GGCCGTCTAT CTGTCCTCGA AGATGGGGTC GATGGCGGCC
AATAGCGCCG GCGGCGCCTA TATCTACCGC TCGTCCAAAG CCGCCCTGAA TGCCGTGGTC
CGCAGCCTCG CCGCCGATCT GGCCGATCGC GCCATCGTCG TCGCCGCCCT CCATCCGGGC
TGGGTGCGCA CCGATATGGG CGGTCCCGAT GGCGACATCG ACGCCGGGGA GTCGATCGCC
GGCCTGCGCC GGGTGATCGC CGCCCTGGCC ACCACCGATA GCGGCCGCTT CCTGGCCTAT
GACGGTGGCG AGGTGCCCTG GTAG
|
|---|
| Protein sequence | MSTILISGAN RGLGLEFARQ YRQEGHRVIG TCRDPGKAGD LLALGAEVLP LDVADLAAVA
GFGAVVGDQP VDLFINNAGV YGGRHSEQDL GEVDSRVWLE TLVVNTIAPL KLTEAILPNL
ERAEAAKAVY LSSKMGSMAA NSAGGAYIYR SSKAALNAVV RSLAADLADR AIVVAALHPG
WVRTDMGGPD GDIDAGESIA GLRRVIAALA TTDSGRFLAY DGGEVPW
|
|---|
| |