Gene Rru_A1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1942 
Symbol 
ID3835366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2250430 
End bp2251257 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content70% 
IMG OID637826041 
Productmethylglutaconyl-CoA hydratase 
Protein accessionYP_427029 
Protein GI83593277 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTGC TTGTTGAAAC GGTTGAACCC CGGGGGGTGG TCCGCTTGAC GCTGAACCGT 
CCCGAGGTGC GCAACGCCTT TGACGACCGC CTGATCGCCG AGCTGACCGA GGCGGTTCTG
CGCCATGGCC GTGATCCGGC GGTGCGGGTG ATCGTGCTCG CCGCCCAGGG CCGGGCCTTC
AGCGCCGGCG CCGATCTGGG CTGGATGCGG CGGATGGCCG ATTTCAGCCG CAGCGAGAAC
CTGATCGACG CCCTGGAACT CGCCCGCATG CTGCAGGTCA TCGATCTTTG TCCCAAGCCG
ACCGTCGCCC TGGTCCAGGG CGTGGCCTAT GGCGGCGGGG TCGGGCTGGT GGCGGCCTGC
GATATCGCCC TGGCCGCCGA GCCGGCGCTG TTTTGCCTGT CGGAGGTGCG CCTGGGGCTG
ATTCCGGCGG TGATCTCGCC CTATGTCATC CGCGCCATCG GTCCGCGCGC CTGCCGCCGC
TTGTTCCTGA CCGCCGAGAC CTTTGGCGCC CAGCGCGCCC TCGGGCTGGG GCTGGTCAGC
GACGTCGTCG CCGCCGATGC CCTGGAAGGG GTGGCGGCGG CGGTGATCGC CGCCCTGCTC
GCCGGCGCCC CCGAAGCCCA GAGCGAGGTC AAGGATCTGA TCCGGCTGGT CGAGAACAGC
GTGATGGACG AGGCGCTGTT GCGCGAGAGC GCGGTCCGCA TCGCCGACCG CCGCTCCTCG
GACGAGGCGC GCGAGGGCAT GGCCGCCTTT CTGGAAAAAC GCTCGCCGGT CTGGATGACC
CCCGACCCCG AGGGCGAGGA GGCGCGCGCG TGTTTTCACG ACTGCTGA
 
Protein sequence
MDLLVETVEP RGVVRLTLNR PEVRNAFDDR LIAELTEAVL RHGRDPAVRV IVLAAQGRAF 
SAGADLGWMR RMADFSRSEN LIDALELARM LQVIDLCPKP TVALVQGVAY GGGVGLVAAC
DIALAAEPAL FCLSEVRLGL IPAVISPYVI RAIGPRACRR LFLTAETFGA QRALGLGLVS
DVVAADALEG VAAAVIAALL AGAPEAQSEV KDLIRLVENS VMDEALLRES AVRIADRRSS
DEAREGMAAF LEKRSPVWMT PDPEGEEARA CFHDC