| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1933 |
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| Symbol | |
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| ID | 3835357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2238831 |
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| End bp | 2240330 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637826032 |
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| Product | uroporphyrinogen-III C-methyltransferase |
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| Protein accession | YP_427020 |
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| Protein GI | 83593268 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.287576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGCT TCCCGATTTT TCTGACCCTT ACCGGGGTCC GCGTTCTTGT CGTCGGCGGC
GGCGCCGCCG CGGCCGCCAA GGCGCGTCTG GCGCTCAAGG CCGGCGCCAG GGTCAGCGTT
TTCGCGCCCG CCTTATCGGC CGATTGGCAA GATCTGCGCG GCCATCCCGC CCTTGATCAC
CGCCAGGGCT TTCCCGGCCA GGGCGGCGAG GAGGAGTGGC GCGACGTGCG GTTGGTCTAT
GCCGCCGGCG AAAGCCTGGA AGAGGACAGG GCCGTTCATG CCGCCGCCAG CGCCCGGGGG
GTGCTGGTCA ATGTCGTCGA TCGCCCCGAA TTATGCGATT TCCTGACGCC GGCCATCGTC
GATCGCAGCC CGATCGTCGT GGCCATCGGA ACTGGGGGGC GGGCGCCGGT GCTGGCGCGC
CGGGTGCGCG CCGCCATCGA CCGCTTGCTG CCCGCCCGGC TGGGAGCCCT CGCCCGGCTG
GCCGAGGGCT TTCGCGGCAC GGTCGCCCAA GCCCTGCCCG ATGGCGACCG GCGCCGGCGC
TTCTGGGACC GCTTCTTCGA CGGCGCCCCG GCCCTGGCCG CCCTGGAAGG CGACGAGCCG
CGCGCCCGAA CCGCCGCCCT GCGCCTGCTC AATGACGGCG AGGCCCTGGA CAACGGCGCG
CCGGCCGCCG GGGTCGTTCA TCTGGTCGGC GCCGGACCGG GAGACCCCGA TCTTCTGACC
CTGAAGGCCC AGCGCCTGCT CCAGGAGGCC GATGCCCTGG TTTATGACGA TCTGGTGGGC
GAGGGGATCT TGGATATGGC CCGGCGCGAC GCCGCGCGGA TCTACGTCGG CAAGCGCAAG
GGCCGGGCGA GCCTGACCCA GGAGCAGATT GGCCGGTTGA TGTGCGATCT GGCCGCAGCG
GGGCGGGTGG TGGTGCGCCT GAAAGGCGGC GACCCGGCGG TTTTCGCCCG CCTGTCCGAG
GAAATCGACG CCCTGGCCGC CGCCGGGGTG GCCTGGACGG TGGTGCCGGG GATCACCGCG
GCTTCGGCCG CCGCCGCCGC CATCGGCATC TCGCTGACCG ATCGTGACGG GGCGCCCAGC
GTCACCTTGC TGTCGGGCCA TCGGCGCGCT CCGGCGGCCG GCGAGAGCGA GGCCGCCGTC
GATTGGCGGG CGGCGGCGCG GACCGGTGGC ACCCTGGCGG TCTATATGGG CCTGTCACGG
GCCACGGCGG CGGCCGAGGG GCTGATCGAA GGCGGGCTGT CGGCCGAGAC CCCGGTGGCC
GTGGTTCATG ACGCCAGCCG CCAGGGCCAG CGCGTTTCGC GCGGAACCCT GGGCGAGCTG
CCCCGGCTGG TCGCCCAAGG GGCCTTGGCC GCGCCCGATG CCCCGGGGCT GGTGCTGGTC
GGCAAGGTCG TCGCCAAGGC CGGCCGCCTG CCGGCGATCG CCCCGGTTTT TTCCACCCCG
CGCGCCTTCG CCGGCGATCC GTCCTTCGCC TCCCAAGCCC TGCCGTCCCA GGCGGGCTGA
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| Protein sequence | MDSFPIFLTL TGVRVLVVGG GAAAAAKARL ALKAGARVSV FAPALSADWQ DLRGHPALDH
RQGFPGQGGE EEWRDVRLVY AAGESLEEDR AVHAAASARG VLVNVVDRPE LCDFLTPAIV
DRSPIVVAIG TGGRAPVLAR RVRAAIDRLL PARLGALARL AEGFRGTVAQ ALPDGDRRRR
FWDRFFDGAP ALAALEGDEP RARTAALRLL NDGEALDNGA PAAGVVHLVG AGPGDPDLLT
LKAQRLLQEA DALVYDDLVG EGILDMARRD AARIYVGKRK GRASLTQEQI GRLMCDLAAA
GRVVVRLKGG DPAVFARLSE EIDALAAAGV AWTVVPGITA ASAAAAAIGI SLTDRDGAPS
VTLLSGHRRA PAAGESEAAV DWRAAARTGG TLAVYMGLSR ATAAAEGLIE GGLSAETPVA
VVHDASRQGQ RVSRGTLGEL PRLVAQGALA APDAPGLVLV GKVVAKAGRL PAIAPVFSTP
RAFAGDPSFA SQALPSQAG
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