Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1925 |
Symbol | |
ID | 3835349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2229304 |
End bp | 2230770 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637826024 |
Product | GntR family transcriptional regulator |
Protein accession | YP_427012 |
Protein GI | 83593260 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTGG ACCTGCTGCC CGAAGGCATG CCGCTGCAGG CGGCGCTGAT CGCCCTGTTG CGGCGGCGGA TCTTCAGCGG CGCGCTTGGC GCCGGGGCGC GCCTGCCTTC GACCCGGGCG CTGGCCGCCG AGTTGGGGGT CTCGCGCAAT ACCGTGCTGG CGGCTTACGA TAGCCTGCGC GCCGAAGGCT ATCTGATCGC CCGTCCCGGG TCGGGCCACC GGGTGGCCGG CGACCTGCCC GAACCGGCCG ATCTGGGGGC GGGCCTTGGC GGGGCGCCGG CCGGGGTGGG AACGGCGGTG GCGCTGTCCC AATGGGGGCG GCGGGTGACG CCCGAGGATC CGCAGCCCGC CGTCGCCGCG TCGCCCCGCT ATGACTTTCT CTACGGAACA TCGAATACCA CCTTGTTTCC CCACAAGGAT TGGCGCCGCG CCATTCTTGG GGTTCTCGAC TTGCGACGGC GCGAGCCCGG TCAGTTGTTT TATCAAGACG CCATGGGTAG CCCGGCCTTG CGGCGGGCGG TGGCCGACTG GCTGCGCCTG CATCGCGGCA TCGATACCGG GACGCGTGGC GTGGTGATTA CCAACGGCAG CCAACAAGGC ATTGATCTGG CAACGCGTTT GCTGGTCGAT CCCGGCGCCG TCGTCGCCGT CGAGGAGCCG GGCTACCAGG GATTTCGCGA AATCCTGTCA GCGCTTGGCG CCCGGCTTTT GCCGATCCCG GTCGATGACC AGGGCCTGCG GGTCGATCAT CTGGAGGCTG TTTCCCGCGA CGCGGCGGTG GCCGGGGTTT GCGTGACGCC CTCCCATCAG TTTCCAACCG GGGCCGTTCT GTCACCGGCC CGGCGGATGG CCCTGCTGGC CTGGGCCAAG GCCGAGGGCG CCTGGGTGAT CGAGGACGAT TATGACAGCG AGTTCCGTTA TGGCGCCCGA CCGCTTGCCG CCCTGGCCGC CGGCGATGAC GACGGGCGGG TGATCCATCT CGCCAGCTTT TCCAAGGCGT TGTTTCCGGC CTTGCGCCTT GGCATGGCCT CGGTTCCCGC CGGGTTGCTC GGGCCGTTCG GCGCGGCGCG GCGGCTCAGC GATCGCCATG GCCCGGCCCT GGAGCAAGAC GCCCTGGCGC GCTGGATGGA AGACGGCACT TTCGCCCGCC ACCTCCGCCG CGTCCGCACC CGTCAGGCCG AGCGGCGGGC GGTGCTGGTC GACGCCTTAA CCCGCCATTT CGTCGGAATG GTGCGGATTG GCGGGGCGAG CGCCGGTTTG CACCTTGTGG CGTGGTTTCC CGGTCTCGAC GCGGCGGCGA TGGCGGCCTG GGCCGACAGG GCGGCCGTGC TCGGCATCGG CGTCCATCCC ATTACTCGCC ATTACCAGGG CCCAGCCGCC GCCGCCTTCG TTTTGGGCTA TGCCGGCATC TCGGTTGACG ACATCCCGGC GGGGATCGGC TTGCTAAAGG CTTGCGCGCC GCTTTAG
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Protein sequence | MTLDLLPEGM PLQAALIALL RRRIFSGALG AGARLPSTRA LAAELGVSRN TVLAAYDSLR AEGYLIARPG SGHRVAGDLP EPADLGAGLG GAPAGVGTAV ALSQWGRRVT PEDPQPAVAA SPRYDFLYGT SNTTLFPHKD WRRAILGVLD LRRREPGQLF YQDAMGSPAL RRAVADWLRL HRGIDTGTRG VVITNGSQQG IDLATRLLVD PGAVVAVEEP GYQGFREILS ALGARLLPIP VDDQGLRVDH LEAVSRDAAV AGVCVTPSHQ FPTGAVLSPA RRMALLAWAK AEGAWVIEDD YDSEFRYGAR PLAALAAGDD DGRVIHLASF SKALFPALRL GMASVPAGLL GPFGAARRLS DRHGPALEQD ALARWMEDGT FARHLRRVRT RQAERRAVLV DALTRHFVGM VRIGGASAGL HLVAWFPGLD AAAMAAWADR AAVLGIGVHP ITRHYQGPAA AAFVLGYAGI SVDDIPAGIG LLKACAPL
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