| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1904 |
|---|
| Symbol | |
|---|
| ID | 3835328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2206654 |
|---|
| End bp | 2207748 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637826003 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_426991 |
|---|
| Protein GI | 83593239 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.246976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGT CTTCCCGTTT CATCACCCTG GAAGCCCGCC CCGAACCCTC GGCGCTGTGG
GTTTGGGCGG CGCCCCTGCT GGCCGTCGGC CTGACCCTGA TCGCCGGCGG CCTGTTGTTC
GCCGCCCTCG GCAAGGATCC CGTCGCCGCC CTGGCCGGGT TTTTCCTCAA GCCCTTGTCC
AGCCTCTATG GCCTGGGCGA GCTTGGCGTG AAGGCGGCGC CGCTGGCGCT GATCGCCGCC
GGTCTGGCGG TGGGCTTTCG CGGCGGCGTC TGGAACATCG GCGCCGAAGG TCAATTGACC
ATGGGGGCGG TGGTCGGCGG CGGCGTCGGG CTGGCCTTTC TCGAATCGAC CGGGCCGCTG
GTCCTGCCGG CGATGATGCT CTGCGGCGCT TTGGGCGGCA TGGCCTGGGC GGCGATCCCG
GCGCTGCTGC GCACCCGCTT CAACGCCAAT GAGATCCTGA CCAGCCTGAT GCTGACCTAT
GTCGCCCAGT TGTTGCTGAG CTGGCTGGTC CATGGACCCT GGCGCAGCCC CTCGGGCTTC
AATTTTCCCG AAACCGAGAT GTTCGGCCCG GCCGCCACCT TGCCGGTGCT GATCGAGGGA
ACCCGCCTGC ATCTCGGCGT CGTGCTGGCC CTGGTCGTCG TCGGCGCCAT CTGGGTGCTG
CTGGGGCGCA GTTTCATCGG CTTTCAGATC AAGGTCATGG GATTGGCGCC GCGCGCCGGC
GCCTATGCCG GCTTCAGCCA GCGCCGGGTG ATCTGGATGG CGATGCTGCT TTCGGGCGGC
GCCGCCGGTC TGGCCGGATT GTTCGAGGTC GCCGGGCCGA TCGGCCAGCT TCAGCCGGCG
ATTTCGCCCG GGTACGGCTT CACCGCGATC ATCGTCGCCT TTTTGGGCCG GCTCCATCCG
CTGGGCATCG TTTTCGCCGC CTGCTTCATG GCATTGACCT ATCTGGGCGG CGAGACCGTG
CAGATGGATA TGGGGCTGCC CTTGGCGGTG ACCGGGGTTT TCCAGGGCAT GATCTTGTTC
TTCCTGCTGG CCGCCGATGT GTTGATCCGC TACCGGATCC GCCTCGGTCG GGCTGCTTCC
GCAAAGGCTT TGTGA
|
|---|
| Protein sequence | MSRSSRFITL EARPEPSALW VWAAPLLAVG LTLIAGGLLF AALGKDPVAA LAGFFLKPLS
SLYGLGELGV KAAPLALIAA GLAVGFRGGV WNIGAEGQLT MGAVVGGGVG LAFLESTGPL
VLPAMMLCGA LGGMAWAAIP ALLRTRFNAN EILTSLMLTY VAQLLLSWLV HGPWRSPSGF
NFPETEMFGP AATLPVLIEG TRLHLGVVLA LVVVGAIWVL LGRSFIGFQI KVMGLAPRAG
AYAGFSQRRV IWMAMLLSGG AAGLAGLFEV AGPIGQLQPA ISPGYGFTAI IVAFLGRLHP
LGIVFAACFM ALTYLGGETV QMDMGLPLAV TGVFQGMILF FLLAADVLIR YRIRLGRAAS
AKAL
|
|---|
| |