Gene Rru_A1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1902 
Symbol 
ID3835326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2204594 
End bp2205673 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content64% 
IMG OID637826001 
Productbasic membrane lipoprotein 
Protein accessionYP_426989 
Protein GI83593237 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGACTT CGATCATCCG CATGCTCGTG GGGGCGGCGC TCGCCGCTGG TCTGGCGACC 
GGCGGCGCCC AGGCCGACGA GCCCACCAAG GTCGGTTTCA TCTATGTCGG TCCGGTCGGC
GACTTCGGGT GGTCGCACCA GCACGACCAG GGCCGTCAGG CCCTTGAGAA GGCCTTCGGC
GACAAGGTGA AGACCTCCTT CGTCGAAAGC GTTCAGGAAG GCGCCGATGC CGAGCGCGTG
GTCCGCCAGT TCGCCGCCGG CGGCTATGAT CTTGTTTTCA CCACGTCGTT CGGCTTCATG
AATCCGACGC TGAAGGTCGC CCAGCAGTTT CCCAAGGTGA AGTTCGAGCA TGCCACCGGC
TACAAGCGCT CGGCCAATGT CGCCACCTAT GCCGCCCGCT TCTATGAGGG GCGTTATGTC
ATCGGCGTCA TCGCCGGTCT GACCACCAAA TCGAAGGTGG TCGGCTATGT CGCCTCCTTC
CCGATTCCCG AGGTGGTTTC GGGCATCAAC GCCTTCGCCC GCGGCCTGCA CAGCGTCAAC
CCCGAAGCCC AGGTCAAGGT CATCTGGGTC AACTCGTGGT ACGATCCCGG CAAGGAGCGC
GAGGCCGCCG AGACCCTGAT CGCCCAGGGC GCCGACGTTC TGAGCCAGCA TACCGACAGC
CCGGCCCCGG TGCAGGTCGC CGAGGAAAAG GGCATCTTCG CCTTCGGTCA GGCCTCGGAC
ATGAGCCGCT TCGGGCCCCA TGCCCAATTG ACCGCCATCG TCGACAACTG GAACGAATAT
TACATCGACC GGGTCAAGGC GGTGATGGAC GGCACCTGGA AAGCCGAGGA CACCTGGGGC
GGTCTCGCCG CCGGCATGGT GCATCTCGCC CCCTATAACG CCGCCCTGCC CGCCGATGTG
GTCGAAAAGG CCGAAGCCGT TCGCAAGGCG ATCGTCGACG GCAGCCTGCA TCCCTTCGCC
GGCCCTTTGA AAAATCAGGC CGGTCAGGAG ATCGTGCCCG CCGGTCAGGT TCTGGCCGAC
GACAAGATCC TGTCGATGGA CTGGTACATC GAGGGCGTGC AGGGCCAGCT GCCGAAATAA
 
Protein sequence
MRTSIIRMLV GAALAAGLAT GGAQADEPTK VGFIYVGPVG DFGWSHQHDQ GRQALEKAFG 
DKVKTSFVES VQEGADAERV VRQFAAGGYD LVFTTSFGFM NPTLKVAQQF PKVKFEHATG
YKRSANVATY AARFYEGRYV IGVIAGLTTK SKVVGYVASF PIPEVVSGIN AFARGLHSVN
PEAQVKVIWV NSWYDPGKER EAAETLIAQG ADVLSQHTDS PAPVQVAEEK GIFAFGQASD
MSRFGPHAQL TAIVDNWNEY YIDRVKAVMD GTWKAEDTWG GLAAGMVHLA PYNAALPADV
VEKAEAVRKA IVDGSLHPFA GPLKNQAGQE IVPAGQVLAD DKILSMDWYI EGVQGQLPK