Gene Rru_A1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1898 
Symbol 
ID3835322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2199791 
End bp2200546 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID637825997 
ProductLexA repressor 
Protein accessionYP_426985 
Protein GI83593233 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCACGC GCAAGCAGTA CCTGCTGTTG TCGTTCATCG ACCAGCGTTT GAAGCTTTCG 
GGCGTTTCCC CCTCGTTCGA CGAGATGAAG GACGCCCTGG GGCTCAAGTC CAAATCGGGC
ATTCACCGCC TGATCAAAGG GCTGGAGGAA CGGGGCTTTC TCAAGCGCCT TCCCCATCGG
GCCCGCGCCC TGGAAGTGCT GCGCCTGCCC TGCAATCTGA CCTTCGACGG CGACGGCGAA
GCCCTTGACG ACGGGCAGCC CGCGCCGCTG TTCGGCGGCC CTCTGCCGGA AACCGGATTC
TCGCCCCAGG TCATCCGCGG CAATTTCACC CCGACCCTGC CGTCGACCCA AGTACCGCAG
GTGCTGTTCA CCGAGTCGAT CAGCCTGCCG CTTTTGGGCA AGATCGCCGC CGGCACGCCG
ATCGCCGCCC TGATCGATCC GACGTCGAGC ATCGATGTGC CGGCCAGCAT GGTGCGCGGC
GGCGAGCATT TCGCCCTGCG CATCGAAGGG GACTCGATGA TCGAAGCGGG CATCCTCAGT
GGTGATCTGG CGGTGGTGCG GCGCTGCGAC GAAGCCGAAA ACGGCACGGT CATCGTCGCC
CTGGTCGATA ACGAGGAAGC CACCCTGAAG CGCCTGCGCC GCAAGGGGGC CTCGATCGCC
CTGGAACCGG CCAACCGCGC CTTCAAAACC CAGATCTACG GCCCCGACCG CGTGCGCATC
CAGGGTCGGC TGGTCGGGCT GATCCGCAGC TATTAG
 
Protein sequence
MLTRKQYLLL SFIDQRLKLS GVSPSFDEMK DALGLKSKSG IHRLIKGLEE RGFLKRLPHR 
ARALEVLRLP CNLTFDGDGE ALDDGQPAPL FGGPLPETGF SPQVIRGNFT PTLPSTQVPQ
VLFTESISLP LLGKIAAGTP IAALIDPTSS IDVPASMVRG GEHFALRIEG DSMIEAGILS
GDLAVVRRCD EAENGTVIVA LVDNEEATLK RLRRKGASIA LEPANRAFKT QIYGPDRVRI
QGRLVGLIRS Y