Gene Rru_A1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1881 
Symbol 
ID3835305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2179319 
End bp2180329 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID637825980 
Productpyruvate dehydrogenase (lipoamide) 
Protein accessionYP_426968 
Protein GI83593216 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID[TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGA CCCGACGCAA ACCCAGGAAC GGATCGTCTC CGGCCACGCC CACGCCCGAC 
GACATCAAAG GCTTCTACCG CGACATGCTG TTGATTCGGC GCTTCGAGGA GAAGGCCGGC 
CAGCTGTATG GCATGGGGCT GATCGGCGGG TTCTGTCATC TCTACATCGG TCAGGAAGCG 
GTGGTCGTCG GCCTGCAGTG TCAGGCCCAT CCCGGTGATT CGATCATCAC CAGCTATCGC 
GATCACGGGC ATATGCTGGC CGCCGGCATG GATCCCAAGG GGGTGATGGC CGAGCTGACC 
GGCCGCCGGG GCGGTTATTC CAAGGGCAAG GGCGGCTCCA TGCACATGTT CAGCAAGGAG 
AACGGCTTTT ACGGCGGTCA CGGCATCGTC GGCGCCCAGG TGCCCTTGGG CACCGGCTTG 
GCCTTCGCCC ACAAGTATCG CGGCGATGGC GGCGTGTGCT TTTGCTATCT GGGCGACGGC 
GCGGCCAACC AGGGTCAGGT CTATGAAAGC TTCAACATGG CCGCCCTGTG GAAGTTGCCG 
GTCATCTATG TGATCGAGAA CAACAAATAC GGCATGGGCA CCTCGGTCGA GCGGGCGAGC 
GCCACCAAGG ATCTGGCCAC CCGCGGCGCC GCCTATGGCA TCCCGGGGAT TTCCGTCAAC 
GGCATGGACG TTCTCGCCGT CAAGGCCGAG AGCGAGGAGG CCGTTGATCG GGTGCGCGCC 
GGCGAGGGGC CGCTGATCCT GGAAATGAAG ACCTATCGCT ATCGCGGCCA TTCGATGTCC 
GATCCGGCGA AATACCGGAC CAAGGAGGAG GTCAGCAAGA TGCGCGCCGA AAGCGATCCC 
ATCGACCACC TGCGCCAGAC TATCGTCAGC GACGCCATCC TCGATGAGGA GGCGTTGAAG 
GAGATCGACA AGGAAATCAA ATCCGTCGTC TCCCAAGCCG CCGAATTCGC CCAGAACAGC 
CCCGAGCCCG ACGCGGCCGA GCTGTACACC GACGTTCTCG TCGAAGCCTG A
 
Protein sequence
MAATRRKPRN GSSPATPTPD DIKGFYRDML LIRRFEEKAG QLYGMGLIGG FCHLYIGQEA 
VVVGLQCQAH PGDSIITSYR DHGHMLAAGM DPKGVMAELT GRRGGYSKGK GGSMHMFSKE 
NGFYGGHGIV GAQVPLGTGL AFAHKYRGDG GVCFCYLGDG AANQGQVYES FNMAALWKLP 
VIYVIENNKY GMGTSVERAS ATKDLATRGA AYGIPGISVN GMDVLAVKAE SEEAVDRVRA 
GEGPLILEMK TYRYRGHSMS DPAKYRTKEE VSKMRAESDP IDHLRQTIVS DAILDEEALK 
EIDKEIKSVV SQAAEFAQNS PEPDAAELYT DVLVEA