Gene Rru_A1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1875 
Symbol 
ID3835299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2172205 
End bp2173710 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content67% 
IMG OID637825974 
Productmulti-sensor Signal transduction histidine kinase 
Protein accessionYP_426962 
Protein GI83593210 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTCG CTCCACCCCG CGGCACCAAC GACCCCGAGG ATTTTCCCGG GGAAGGCAGC 
GATCCCCGGA CGCTCTTTCC CGCTCCGCTC TCGGCCCGGC TGGTTCTGCT CGGGGGCCTG
TTCACCCTGT TCAGCACGGT GGCCATCACG CTTTGGCTGA TCGGACTGGC CGCCCGCTAC
CCCGATCACG CCCTTTTGGC GCCGGTGGCC GGCGGCGGCG CGGTCATCGT CACCCTGACC
GGGGTCTGCC TGATCGCCTT CCTTTTCCGC GAACGCCGCC ATCTCGCCGC CGAGCGCCGG
CTGGCGCTCA GCGAGGCCCG GTTGCAGACG GCCCTGGAAA ACACCGGGGA CGGCATCTGG
GATTGGCAGA TCCCCGGCGA TGTCGTTCAT CTCAACGGCG CGCTGATCGC CCGCCTGGGC
TTTCCCGTCG ACACCCCCTC GCCCACCGCC ACCTGGGAAA CGATGATCCA TCCCGAGGAT
CGCCCGGCCA CCCTTGCCGC CTTTCACGAC CATCTCGCCG GCAAAACCCC GAGCTATCAT
GCGCGCTATC GCTGGAAGCT GCCCGATGGC GTGATGATCT GGGTAGAGGC CAAGGGCCGG
GTCGTCACCC GCGACCGCTC GGGCAAGCCC TTGCGCATGA CCGGAACGCT GAGCGACGCC
ACCCCTCAGG TCGAAGCCGA AGAGCTGATG CGCGAGAAAT CGCGGCGGCT CGAGGAGTCC
AACCGCGATC TCGAACAATT CGCCTATGTG GCCTCCCACG ACCTGCAAGA GCCGCTGCGC
ATGGTCTCGT CCTATCTGGG ACTGCTGCGC CGGCGCCACG GCGACCAGCT CGCCCCCGAG
GCGCTGGAGT TCATGTCCTA TGCCGAAGAC GGCGCCAAGC GCATGTCACG GCTGATCCTC
GACCTTTTGG AGTATTCGCG CGTCACCACC CGGGGGGAGC CCCCGGAAAC GGTCGCCCTG
GCCGAGGTGA TCGACGAAGC GCGGTCCAAC CTGCGCATGA TCATCGACGA GACGGCGGCG
CGGATCGACC TGCTGGGCTG CGATCGTACG GTTTTGGCCG ATCGCGGACA GGTGGTCCGC
GTCTTTCAGA ATCTGATCGG CAATGCCCTG AAATACCGTT CGCCCGACCG GCCGCCGATA
ATCACCCTGC GCTGTGGCGA AGACGAGGGG TGGGTCAACG TCAGCGTGGC CGATAACGGC
ATCGGCTTCA GTCCCGAGCA CGCCGAACGG ATCTTCATCA TCTTCCAACG CCTGCATGGC
CCAAAAGCCT ATGAGGGCAC CGGCATCGGC CTGTCCATCT GCAAACGCAT CATCGAGCGC
CACGGCGGCA CCATCGAAGC CCAGGGAACC CCGGGCGAAG GGGCCCTCTT CCGCTTCACT
TTGCCCCGCG CCCCCGGACC CTCCCGGTCG ACGGGCGGCG CCCCCGACAA CCAAGACCGT
CGCCGCCGCG ACCAAGGCCG GGGCGCTGAC GGGAGGGGGC GCGATCAGGG CCGCTTGGCG
CCGTAA
 
Protein sequence
MLFAPPRGTN DPEDFPGEGS DPRTLFPAPL SARLVLLGGL FTLFSTVAIT LWLIGLAARY 
PDHALLAPVA GGGAVIVTLT GVCLIAFLFR ERRHLAAERR LALSEARLQT ALENTGDGIW
DWQIPGDVVH LNGALIARLG FPVDTPSPTA TWETMIHPED RPATLAAFHD HLAGKTPSYH
ARYRWKLPDG VMIWVEAKGR VVTRDRSGKP LRMTGTLSDA TPQVEAEELM REKSRRLEES
NRDLEQFAYV ASHDLQEPLR MVSSYLGLLR RRHGDQLAPE ALEFMSYAED GAKRMSRLIL
DLLEYSRVTT RGEPPETVAL AEVIDEARSN LRMIIDETAA RIDLLGCDRT VLADRGQVVR
VFQNLIGNAL KYRSPDRPPI ITLRCGEDEG WVNVSVADNG IGFSPEHAER IFIIFQRLHG
PKAYEGTGIG LSICKRIIER HGGTIEAQGT PGEGALFRFT LPRAPGPSRS TGGAPDNQDR
RRRDQGRGAD GRGRDQGRLA P