Gene Rru_A1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1857 
Symbol 
ID3835281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2156281 
End bp2156697 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content63% 
IMG OID637825956 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_426944 
Protein GI83593192 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0490453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCG TTACCGTCGA GGACTGCGTC CTCAAGATCC CCAATCGGTT CGAACTGGTG 
CTGGTCGCCG GCCAGCGGGC GCGTGACATC TCGGCCGGAT CGGCCCTGAC CGTGGATCGT
GACAACGATA AGAACCCGGT CGTGTCGCTG CGCGAAATCG CCGATGGCAC CGTTGATATC
CCCAATCTCA AGGAAGCCGT CATCCAGGGG CTGCAAAAGC ACGTCGAAAT CGACGAGCCC
GAGGAAGACG ATTTCGACGC CATGGGCCTC GATCGCGATC TGATGCCCGG GGTCGCCCTG
GCCGAGGATG ACGACACCCT GGAAGCCGAC GGCCTGACCA TTCACGATGG CGCCGATTCC
GATCTCGACC TGTCCGATGA CGCCGGCCAG GACACCGATG AGGCGGACGA AGACTAG
 
Protein sequence
MARVTVEDCV LKIPNRFELV LVAGQRARDI SAGSALTVDR DNDKNPVVSL REIADGTVDI 
PNLKEAVIQG LQKHVEIDEP EEDDFDAMGL DRDLMPGVAL AEDDDTLEAD GLTIHDGADS
DLDLSDDAGQ DTDEADED