Gene Rru_A1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1853 
Symbol 
ID3835277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2151691 
End bp2152428 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content59% 
IMG OID637825952 
Productsignal peptidase I 
Protein accessionYP_426940 
Protein GI83593188 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.687147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGAA AAAAGGGCGG GGGCCTGGGC GAGACGATCA AAACGGTCGT CTATGCCTTT 
CTGATCGCCA TCGTCATCAG AACATTCGCC TACGAACCCT TTCGCATTCC CTCGGGGTCG
ATGATTCCGA CCCTGCTGGT GGGCGATTAT CTGTTCGTGT CGAAATTCTC CTATGGCTAT
TCGCGCTTTT CCTTCCCGAT GGGGATCATT CCCTTTAGCG GGCGGGTGTT GGGCGATGTG
CCCAAGCGCG GCGATGTCGT GGTCTTCAAG GAGCCCAACG ATACCTCTGT CGATTTCATC
AAGCGGGTGG TCGGACTGCC CGGTGATCGG ATCCAGGTGA TCGACGGCAT CTTGAACGTC
AACGGCGAGC CGGTGCGCCG CGAGCGGACC GAGGACTTTG TCCAGCGCGA AGCCGGCGGC
AGCGTGCTGC GCCTGACCCA ATATCAGGAA ACCTTGCCCA ACGGCGTGGT CCACCCCATT
CTCGAGATCC ATGGCGATAC CTATTTTCTC GATAACACCC GCGAGTTCCG GGTGCCCGAG
GGCCATTATT TCATGATGGG CGACAACCGC GACAGCAGCC AGGACAGCCG GGCGACGGTG
GGCTTCGTGC CGGCCGAGAA TCTGGTTGGA CGGGCCGAGT TCGTGTTCTT CTCGCACGAT
GGATCGGCGG CGATCTGGCA GGTCTGGAAA TGGCCCTTCG CCATTCGCTG GGACCGCTTC
TTCCATTCGA TCGATTAA
 
Protein sequence
MSRKKGGGLG ETIKTVVYAF LIAIVIRTFA YEPFRIPSGS MIPTLLVGDY LFVSKFSYGY 
SRFSFPMGII PFSGRVLGDV PKRGDVVVFK EPNDTSVDFI KRVVGLPGDR IQVIDGILNV
NGEPVRRERT EDFVQREAGG SVLRLTQYQE TLPNGVVHPI LEIHGDTYFL DNTREFRVPE
GHYFMMGDNR DSSQDSRATV GFVPAENLVG RAEFVFFSHD GSAAIWQVWK WPFAIRWDRF
FHSID