Gene Rru_A1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1846 
Symbol 
ID3835270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2144459 
End bp2145553 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID637825945 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_426933 
Protein GI83593181 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGAC GAGAGTTCCT TTCGGCTTCC GCCGCCGCCG CGACGGGAGG ACTATCCTTA 
GACGGCCTTT CCCGCCCGGC CCTGGCCAAC GGCGCCAAAA CCCTGACAAT GGTCACGACC
TGGCCCAAGG ATTATGTCGG CCTGGGCGAA AGCGCCAGCC GGCTGGCCGC CCGGGTTCGC
ACGATGAGTG GGGGGCGCTT GTCGATCACC GTCTATGCCG CCGGCGAACT GGTTCCCGCC
TTCGAGGCCT TCGAGGCCGT GGCCAATGGC ACGGCCGATC TCTACCACGG CGCCGAAACC
TATTGGGAAA GCCGCTCCAG CGCCTTCAAC TTCTTTTGCG CCGTTCCCTT CGGCCTGACG
GCGATCGAAA CCAGCGCCTG GATCCACCAT GGCGGAGCCC AGGCGCTGTG GGACGCCTTG
TCGGCCCCTT ACGGCATCAA GCCGATGCTC GCCTCGGCGA CCGGGGTGCA GATGGGCGGA
TGGTTCAACA AGGAAATCAA ACGGGTCGAG GATTTCAAGG GCCTGCGCAT GCGCATTCCC
GGCCTGGGCG CGCGCATCCT CAAAGAGGTT GGCGCCGTGC CCGTAGCGCT GCCCGGCAGC
CAGATCCACG ACGCGCTCCG CGATGGTGCC ATCGACGCGG CGGAATGGAT CGGCCCGTGG
AGCGATCTGG CGCTCGATCT GCAAAAGGTC GCCCGCTACT ACTACTATCC GGGCTTCCAC
GAACCCGGAA CCTCGCTGGC CGTCGGCATC AATCTCGGGG TCTGGCGCGG CTTGTCCGAC
CAGGAGCGGG CGATCATCGA GGCCGCCTGC GGCGCCGAAC ACGCCTTTAG CTTGGCCGAA
TACAACGCCC GCAACGGCGA CGCCCTGCAT ACCCTGGTGA CCAATCACGG GGTGCAACTG
CGCGCCTTCC CCACCCAGGT TCTGCTGGAA CTGGGCAAGA CGGCGGGTCG GGTCGTGCGG
GCGGCGGCGG CGGATTCCCC GGAAACCCGA CGGATCTACG ACCATTACAC CGCCTTCCGC
CGCAAGGCCC TGACCTGGGC CCAGCTCTCC GATCAGGCTT TCTGGAACGC CCGGTCACTG
CCGTTCGAGT ATTAA
 
Protein sequence
MDRREFLSAS AAAATGGLSL DGLSRPALAN GAKTLTMVTT WPKDYVGLGE SASRLAARVR 
TMSGGRLSIT VYAAGELVPA FEAFEAVANG TADLYHGAET YWESRSSAFN FFCAVPFGLT
AIETSAWIHH GGAQALWDAL SAPYGIKPML ASATGVQMGG WFNKEIKRVE DFKGLRMRIP
GLGARILKEV GAVPVALPGS QIHDALRDGA IDAAEWIGPW SDLALDLQKV ARYYYYPGFH
EPGTSLAVGI NLGVWRGLSD QERAIIEAAC GAEHAFSLAE YNARNGDALH TLVTNHGVQL
RAFPTQVLLE LGKTAGRVVR AAAADSPETR RIYDHYTAFR RKALTWAQLS DQAFWNARSL
PFEY