Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1840 |
Symbol | |
ID | 3835264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2137867 |
End bp | 2140332 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637825939 |
Product | penicillin amidase |
Protein accession | YP_426927 |
Protein GI | 83593175 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.643427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGCC TTGGACACTG GATGCTCCGT CTCGGCCTAG GCGCCGTGGC CCTGGGTCTT GTCGCCGCCC TGGTCCTTGG GCTGGCGCTG ACCGGATCGC TGCCGCGCAC CAGCGGCCGG ATCGAGGTGA CGACCGGCGG CGCCCTGCCG GTGGACGATC CGCAACGGCC GGGCTCGTCC ACAACCTGGG GCGGGCTTTC CGGCCCCATC GACATCATCC GCGACCGCTA CGCCATCCCG ACCATCCGCG CCGCCAACGA CCGCGATGCC GCCTTCGCCC TGGGCGTCGT CCATGCCCAG GACCGGTTGT GGCAAATGGA AGGCATGCGC CGCCTGGGGG CCGGACGCAT GGCCGAATTG CTCGGCCCCC GCGCCCTGCC CATCGACCGC TTCATGCGCA CCCTGGGCCT GCACGCCCTG GCGGCGGAGA CCTACCGGCG GATGCCCGCC GACGAGCGCG CGGTGATGGA AGCCTATTGC GCCGGCGTCA ATCAGATCAT CGGCGCGAAA TGGACGATCC CGCCCCCGGA ATTCCTGATG CTGCTGGCCC GGCCCGAGCC CTGGCGGCCC GTCGATTCGC TGGTCTGGGG CCGGTTGATG GGCCTGTGGC TTTCCGCCGA TTGGCAAGAG GAACTGGTGC GCGCCGCCTT GGCCAAAAGC CTGTCGCCCG AGCGCCTGAA AAGCCTGTGG CCGGCCTTTG GCCGATCGGA TGTCGCCGCC CGTCCCGCCG CCGCGCCGCT GTCGGGGGAG GCCGCCCTGG CGCTTCTCGC CGCCTTTCCC AAGGCCCTGG CCCCGACCCT GGCCTCGAAC GCCTGGGCGG TCGGCGGCGG CAAGACCGCC AGCGGCCAGC CGCTGCTCGC CAGCGATCCC CACTTGGGGT TTCAGGCGCC GATTCAATGG TATCTGGCGC GCCTTGAAAC CCCCGAAAGA ACCCTGACCG GGGCGACTTT TCCCGGGGTT CCCCTGACGG TCATCGGCAC CAATGAACGC GTCGCCTGGG GGCTGACCAC CACCCATTCC GACACCATGG ATCTGTTCGT CGAACGCGTC GTCGATGCCG ATCATTATCT GACCGAAAAC GGCCCCGAAC CCTGGCTGCG GCGCACCGAG ACCCTGGCCG TGCGCGGCGC CCCCAGCGAA ACCCTGGAGG TTCGCGCCTC GCGCCATGGG CCGGTGATCT CGGACGTTCT GCCCGCCGCT TCGGCCGACC TGGGCCACGC CGCCCTCGGC GAGGGAGAGG CGCTGACCCT GGCGGCCACG GCGTTGCGCC CCGATGACCA AACGGCGCTG GCGCTGCGCG CCCTCAACCG GGCGGGCACG GCCGACGAGG TGCGCAAGGC GGCGCGCGGC TTCCAATCGC CCCAGCAGAA CCTGATCTAC GCCACCGCCG AGGGCGCCAT CGGCCGGCTC TCGCCCGGGC TGACGCCGCT GCGCGCCGGG GGGCCGGGGT TGCTGCCGCA AACGGGCTGG ACGTCGACCA GCCGCTGGAC CGGCTATATT CCCTTTGAGG ATCTTCCCGC CGAAAGCGAT CCGGCAAGCG GCTTTGTTTA CAACACCAAC AGCGCCATCG TCGGCGAGGA TTATCCCCAT TACCTGATCG ATGCCTGGCC GGGCGAGGAT CGGGCGGCGC GCCTTGCCCG CCTGCTGGCT TACCGCGATG ACCATGGCCC GCGAGACATG GCGCTCTATC AGCTTGATAC GGTCTCCCAT GCCCTGGAAA CCCTGTTGCC CCGCCTGCTT GATTTCCCCG CCGCCCTGCG CCCTGCGGGC TCGGCCGTCG CCCGCGCCCA TGCCCTGCTG GCCGACCCCG GCTGGTCCTT CGACATGGGG GCGCACCGCA CCGAACCGCT GATCGCCACC GCCTGGCTGG TCGCCGTCAA TCGCCTGCTG TTCGCCCCGG CGATGGGGCC GGCCTTCGCC GCCTGGGAAA GGCTGGACCC GGCCGTGCTG CACCGGGCGC TTGATGGCGC GGGATCGTGG TGCGACCCCG CGGCCGACGC CGAAGGCCTT ACCGGCTGCG ACCGTCTCAA GGCCCGGGCC CTCGACGAGG CCCTAAGCGG CCTCGTCGAG TCCCTGGGCG GCGCCGATCC CTTCACCGTG ACCTGGGGCG AGGTCCACCG CGCCCATTTC CGTCACCCGC TGTTTCGCTA TCTGCCGGCT CTGGCCAAGC TGACCACCCT GGAAACGGCG ACGGGGGGCG ATGATTTCAC CCTGTCGCGC GGCAGTTGGG GCGGCGATCG GACCGACCCC TTCGCCCATG TCCATGGCGC CGGCCTGCGT GCCGTGATCG ATTTCGCCAC CATCGCCGCC CCGGGTTTCA TTCTGGCCAC CGGCCAGTCC GGGCACCCGC TGTCCCCCCA TTACCGCGAC ATGGTCGATC TGTGGCGGCG CGGCGCGCTG ATCACCGTCG ATGGCGCCGA CCCCTCGGGC GGCCATCTCA TCCTCGAACC GGTGGGCGAC CGCTAA
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Protein sequence | MTRLGHWMLR LGLGAVALGL VAALVLGLAL TGSLPRTSGR IEVTTGGALP VDDPQRPGSS TTWGGLSGPI DIIRDRYAIP TIRAANDRDA AFALGVVHAQ DRLWQMEGMR RLGAGRMAEL LGPRALPIDR FMRTLGLHAL AAETYRRMPA DERAVMEAYC AGVNQIIGAK WTIPPPEFLM LLARPEPWRP VDSLVWGRLM GLWLSADWQE ELVRAALAKS LSPERLKSLW PAFGRSDVAA RPAAAPLSGE AALALLAAFP KALAPTLASN AWAVGGGKTA SGQPLLASDP HLGFQAPIQW YLARLETPER TLTGATFPGV PLTVIGTNER VAWGLTTTHS DTMDLFVERV VDADHYLTEN GPEPWLRRTE TLAVRGAPSE TLEVRASRHG PVISDVLPAA SADLGHAALG EGEALTLAAT ALRPDDQTAL ALRALNRAGT ADEVRKAARG FQSPQQNLIY ATAEGAIGRL SPGLTPLRAG GPGLLPQTGW TSTSRWTGYI PFEDLPAESD PASGFVYNTN SAIVGEDYPH YLIDAWPGED RAARLARLLA YRDDHGPRDM ALYQLDTVSH ALETLLPRLL DFPAALRPAG SAVARAHALL ADPGWSFDMG AHRTEPLIAT AWLVAVNRLL FAPAMGPAFA AWERLDPAVL HRALDGAGSW CDPAADAEGL TGCDRLKARA LDEALSGLVE SLGGADPFTV TWGEVHRAHF RHPLFRYLPA LAKLTTLETA TGGDDFTLSR GSWGGDRTDP FAHVHGAGLR AVIDFATIAA PGFILATGQS GHPLSPHYRD MVDLWRRGAL ITVDGADPSG GHLILEPVGD R
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