Gene Rru_A1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1821 
Symbol 
ID3835245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2120743 
End bp2121300 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID637825920 
ProductNusB antitermination factor 
Protein accessionYP_426908 
Protein GI83593156 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTGC AGGACGATAA GCCGGGCTCT GCCCCGAAAG AGCGCAGCGG TCGTCAGATC 
CGCAGCAGCG CCGCCCGACT GGCGGCGGTC CAGGCGCTTT ATGTGCTTGA TCTGGCCGAG 
GACGCCCGCG TCGATCAGGT GGTGCTTGAT TTCATGAGCG GGTCGATGGG CGGCATGGCC 
ATCGTCGAGG TCGCCGATCC CGAGGGCATC TTCGATCCCA CCGAAGAGAT CGCCGCCCTG 
GAACCCCCCG ATGGCGAGTT GTTCGCCATG CTGGTGCGCG GCGCCCATGC CGAACTGGCC 
CGCCTTGACG AGGTGATCGG CGCCAGCCTG TCGGCCGATT GGCCCTGGGA CCGCCTAGAG 
CCGGTGGTCC GCGCCGTGTT GCGCGCGGGG GTTTATGAAT TGCTCGAACG CCAGCGCACG 
CCGCCGCGCG TGGCGATCAA GGAATACGTC GATATCGCCG CCGCTTTTTA TTCGGGGGCC 
GAACCGGGGA TGGTGAACGC CGTGCTCGAC CGCGTCGCCC GTTCGGCGCG GCCCGAGGCC 
TTCGGCGGCG GAGTCTGA
 
Protein sequence
MALQDDKPGS APKERSGRQI RSSAARLAAV QALYVLDLAE DARVDQVVLD FMSGSMGGMA 
IVEVADPEGI FDPTEEIAAL EPPDGELFAM LVRGAHAELA RLDEVIGASL SADWPWDRLE 
PVVRAVLRAG VYELLERQRT PPRVAIKEYV DIAAAFYSGA EPGMVNAVLD RVARSARPEA 
FGGGV