Gene Rru_A1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1809 
Symbol 
ID3835233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2105982 
End bp2106527 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID637825908 
Productsigma-24 (FecI) 
Protein accessionYP_426896 
Protein GI83593144 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGC GCGAAAGGCG CGGCTCGCCG GTTCTGGCCG AAGCGCTGGA AAAGGACCGC 
GCCCGCTTCG TTCGCTACGT GCGCGCCAAA CTGGGCGGCG CGGCGGCCGA AGAAGCCGAG
GACGTGGTCT CGGATCTGGT GCTGCGGCTG GTCGAACGCG CCGATCTTCC CGAACAGGTT
GAAACCATGA CGGCTTATCT TTACCGGGCG CTTGGCAATG CCATTATCGA TCTGTTCCGT
CGGCGACGGT CGCGGCCGGC GGCGGAGCGC GACTTTGAAT CCGCAGACGC CGGAGTCCTG
GTCGATCCGG CCCCCAACCC CGAGGCCCAG GTCCTTACCC GCGAGGCGCT GGCGCGCATC
GGCTGGGCGC TGGAACGCCT CAGTCCGGGC GAGCGGGCGG TGTGGATCGC CGTTGAAGTC
GAGGGCTGGA CCTTCCGCGC CCTGTCGGAA GCCTGGGGCC AGCCCATCGG CACCTTACTC
GCCCGCAAAA GTCGGGCGAC CACCGCGCTG CGCCGGCTTT TGAGCGACGA ACGATCGCGT
GGATAA
 
Protein sequence
MSGRERRGSP VLAEALEKDR ARFVRYVRAK LGGAAAEEAE DVVSDLVLRL VERADLPEQV 
ETMTAYLYRA LGNAIIDLFR RRRSRPAAER DFESADAGVL VDPAPNPEAQ VLTREALARI
GWALERLSPG ERAVWIAVEV EGWTFRALSE AWGQPIGTLL ARKSRATTAL RRLLSDERSR
G