| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1796 |
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| Symbol | valS |
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| ID | 3835218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2088061 |
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| End bp | 2090700 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637825893 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_426883 |
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| Protein GI | 83593131 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGACA AGACCTACAG CGCCGCTGAC GTCGAAGAGC GCCTGTATAC CCGCTGGGAA
AACGCCGGCG GGTTCGCCGC TCATCCCGAC AGCCCCGCCC AGCCCTATAC CATCATGATG
CCGCCGCCCA ATGTGACGGG CAGCCTGCAT ATGGGCCACG CGCTGACCTT CACGCTTCAG
GACACCCTGA TCCGTTATCA TCGCATGAGC GGCCGCGACG CCCTGTGGCA GCCGGGGTCC
GATCACGCCG GCATCGCCAC CCAGATGGTG GTGGAGCGCC AGCTCGCCGG CAAGGGGATC
ACCCGCCACG ACCTGGGCCG CGAGGCCTTC ATTTCCAAGG TCTGGGAATG GAAGGCCCAT
TCCGGCGGCA CCATCCAGCG CCAGCTGCGC CGCCTGGGCG CCTCGCCCGA CTGGCCGCGC
GAACGCTTCA CCATGGACGA CGGCTTGTCC AAGGCCGTGC GCAAGGTTTT CGTTCGCCTG
CATAAGGACG GACTGATCTA CCGCGACAAG CGGCTGGTCA ATTGGGATCC GGTGCTGCAC
ACGGCGATTT CCGACCTTGA GGTCGAGCAG CGCGAGACCA AGGGCAAGCT GTGGCACCTG
CGCTATCCGG TGGACGGGCA GAAGGGCCGC TTCATCGTCG TCGCCACCAC CCGCCCCGAG
ACCATGCTGG GCGATACCGC CGTCGCCGTC CATCCCGAGG ACGAGCGTTT CAAGGACCTG
ATCGGCCAGT TCGTCATGCT GCCGCTGGCC CATCGGCGCA TCCCGATCAT CGCCGATGAT
TACGCCGACC CGACCAAGGG ATCGGGCGCG GTGAAGATCA CCCCGGCCCA TGATTTCAAC
GACTTCGAGG TCGGTCGCCG GCACAATCTG CCGATGATCA ATATCCTTGA TATGAATGCC
AAGCTGAACG GCAATGTTCC CCAGGCCTAT CAGGGGCTCG ATCGCTTCGT CGCCCGTGAC
AAGGTGATCG CCGAGTTTGA GGCCCTCGAC CTTCTCGAGA AGATCGAAGA CAACCCGATG
ACCCAGCCCT ATGGCGATCG CTCGGGCGTG ATCATCGAGC CGTGGCTGAC CGATCAATGG
TTCGTCGATG CCGCCAAGCT GGCCGTCGAG CCGATTCGCG CCGTCGAAGA GGGACGGACC
CGCTTCGTTC CCAAGCATTG GGAAAACACC TTTTTCGAAT GGATGCGCAA CATCCAGCCC
TGGTGCATCA GCCGCCAGAT CTGGTGGGGG CATCAGGTTC CGGCGTGGTA TGGCCCCGAT
GGCACCATCT TCGTCGAGGA GACCGAGGAC GAGGCGCGCA CCGCCGCCCA CGACCATTAC
GGCGTCGCCA CCGAACTGAC CCGCGACACC GACGTGCTCG ACACGTGGTT CTCCTCGGCC
CTGTGGCCGT TCTCGACCCT GGGCTGGCCC GACCAGACCC CCGAGCTCGC CCGCTATTAT
CCCGGCGACG TGCTGGTGAC CGGCTTTGAC ATCATCTTCT TCTGGGTCGC CCGGATGATG
ATGATGGGCC ACTACGTCAT GGGCGACGTG CCCTTCCGCG ACGTTTACAT CCATGCCCTG
GTCCGCGACG AGAAGGGCCA GAAGATGTCG AAGTCCAAGG GCAATGTCAT CGACCCCCTG
GATATGACCG ATCAATACGG CACCGATGCC CTGCGCTTCA CCCTGATCGC CATGGCCGCC
CAGGGCCGCG ACATCAAGAT GAGCGAGCAA CGCGTTGCCG GATATCGCAA TTTCTGCACC
AAGCTGTGGA ATGCGGCGCG CTTTTGCCAG ATGAACGACT GCCTGCCGCA GCCGGTCTTC
GATCCGACCA CCGCCCGCCA TACCCTGAAC CGCTGGATCG GCGCCAAGAC CGAGGATTGC
GCCGCCAAGG TCGCCGAGGC GATCGAGGCC TATCGCTTCA ATGACGCCGC CCAGGTCGCC
TATGGCTTCG TCTGGAACAC CTTCTGCGAT TGGTATCTGG AGATGGCCAA GCCGATCCTC
CAGGGCGAGG ACGGGGTGAC CAAGGCGGAA ACCCAGGCGA TGGCGGCTTG GGTTCTTGAT
ACCATCTTGC ACATTCTTCA CCCGATGATG CCCTTCATCA CCGAAGAGCT GTGGGAGAAG
ATCGCCGCGC GCGAGGGTCA GCTTATCACC GCCGCCTGGC CGAAGGGGCA GGGGCTGGCC
GCGCCCGAGG CCGAGGCCGA GATGGATTGG GTGGTCGGCG TCGTTTCGGC GGTGCGCAGC
GTGCGCGCCG AAATGAACGT GCCGCCCGGC GCGCGCATTC CCCTGGTGAT CAAGGGCGCC
ACGGCCGTCA CCCTCGCCCG GATCGAGACC CACCGTCCGC TGCTCGCCAG CCTTGCCCGT
CTCGAGTCGA TCGAGGTCAG CGATACGGTT CCCAGCCAGG GCGCCGCCCA GGTCGTGGTC
GGCGAGGCGA CGTTGGTTCT GCCTTTGGCC GGGGTGATCG ACCTTGACCG GGAGCGGGCG
CGCTTGGGCA AGGAACTGCT CCGCCTGGAT GGCGAAGTGG CGCGGATCGA CAAGAAGCTG
TCCAATCCGG CCTTCATGGC CAAGGCCCCC GACGAGGTGG TCGAAGAGCA GCGCGAGCGG
CGGGCCGAGT ATGAAAGCCA GCGCGACAAG GTGCGTGACG CCCTGACCCG CATCGCCTGA
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| Protein sequence | MLDKTYSAAD VEERLYTRWE NAGGFAAHPD SPAQPYTIMM PPPNVTGSLH MGHALTFTLQ
DTLIRYHRMS GRDALWQPGS DHAGIATQMV VERQLAGKGI TRHDLGREAF ISKVWEWKAH
SGGTIQRQLR RLGASPDWPR ERFTMDDGLS KAVRKVFVRL HKDGLIYRDK RLVNWDPVLH
TAISDLEVEQ RETKGKLWHL RYPVDGQKGR FIVVATTRPE TMLGDTAVAV HPEDERFKDL
IGQFVMLPLA HRRIPIIADD YADPTKGSGA VKITPAHDFN DFEVGRRHNL PMINILDMNA
KLNGNVPQAY QGLDRFVARD KVIAEFEALD LLEKIEDNPM TQPYGDRSGV IIEPWLTDQW
FVDAAKLAVE PIRAVEEGRT RFVPKHWENT FFEWMRNIQP WCISRQIWWG HQVPAWYGPD
GTIFVEETED EARTAAHDHY GVATELTRDT DVLDTWFSSA LWPFSTLGWP DQTPELARYY
PGDVLVTGFD IIFFWVARMM MMGHYVMGDV PFRDVYIHAL VRDEKGQKMS KSKGNVIDPL
DMTDQYGTDA LRFTLIAMAA QGRDIKMSEQ RVAGYRNFCT KLWNAARFCQ MNDCLPQPVF
DPTTARHTLN RWIGAKTEDC AAKVAEAIEA YRFNDAAQVA YGFVWNTFCD WYLEMAKPIL
QGEDGVTKAE TQAMAAWVLD TILHILHPMM PFITEELWEK IAAREGQLIT AAWPKGQGLA
APEAEAEMDW VVGVVSAVRS VRAEMNVPPG ARIPLVIKGA TAVTLARIET HRPLLASLAR
LESIEVSDTV PSQGAAQVVV GEATLVLPLA GVIDLDRERA RLGKELLRLD GEVARIDKKL
SNPAFMAKAP DEVVEEQRER RAEYESQRDK VRDALTRIA
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