Gene Rru_A1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1794 
Symbol 
ID3835216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2086330 
End bp2087019 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID637825891 
ProductTetR family transcriptional regulator 
Protein accessionYP_426881 
Protein GI83593129 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.152901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACC TTCGGAAATC CCGTGGCGAC CAAGGCGAGG TGACGCGCGA AAAGCTGTTG 
ACGGCGGCTT TGGACCTGTT TGGCCGCCGG GGGTTCGATG GCACCTCGAC GCGGGCTTTG 
GCCGATGCCG CCGGGGTCAA TCTTCAGGCC ATTCCCTATT ATTTTGGTGG CAAGGAGGGG 
CTTTACCGCG AAACCGCCGG CGCCATCGCC GACGCCATCG CCGCCCGACT GGCCGACAGA 
CGGGCGCGTA TCGCCGCCCG CCTTGATGAG GCGACCGCGA TGGGGCGGCC GATCGATCCC 
GCGGAGGCCC GGGTTCTGCT GACCGACGTG GTTCAGACGA TGGCCGGGCT TTTCGTAAGC 
AAGGAGTCCG AGCCTTGGGC GCGCTTCCTG ATCCGCGAGC AGATGGAACC AACCGAAGCC 
TTTCGCCAGA TTTACGGCAC GGTGATGAAG CCCGTTCTCG ATCTGGCGGG GCGATTGGTC 
GGCGTTCTGC TGGACGAGGA TCCGGTATCG GAGTCGGTCC GTCTGCGCAC GGTATCGCTG 
ATGGGCGGCG TTCTCGTGTT CCGCGTCGCC CATGCCGCCG CCCTGACCCA CCTTGACTGG 
CCGACCATCG GCGCCCGCGA GGCCGCCGTG GTCGCCGATC TGGCCGGGGA TCTTGTCGCA 
TCGATCGGGC CAAGGGAGAG GCGGGAATGA
 
Protein sequence
MADLRKSRGD QGEVTREKLL TAALDLFGRR GFDGTSTRAL ADAAGVNLQA IPYYFGGKEG 
LYRETAGAIA DAIAARLADR RARIAARLDE ATAMGRPIDP AEARVLLTDV VQTMAGLFVS 
KESEPWARFL IREQMEPTEA FRQIYGTVMK PVLDLAGRLV GVLLDEDPVS ESVRLRTVSL 
MGGVLVFRVA HAAALTHLDW PTIGAREAAV VADLAGDLVA SIGPRERRE