Gene Rru_A1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1770 
Symbol 
ID3835192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2062286 
End bp2063557 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content67% 
IMG OID637825867 
Productseryl-tRNA synthetase 
Protein accessionYP_426857 
Protein GI83593105 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGACC TAAAAGCCAT TCGCGAAACT CCCGAGGCCT TCGACCTCGC CCTGGCCCGT 
CGGCGGCTGG AGCCGCGCTC GGCCCTGGTC CTTGATCTCG ATAGCCAGCG TCGCGCCGTT
CAGACCGAGT TGAACGATCT GCAGGCGCGA CGCAACGAGG CGTCCAAGCG CATCGGCCTG
GTCAAGAAGG AGGGCGGCGA CGCCCAGGCG TTGGTCGATG AGGTCGCCGG CATCAAGGCG
ACGATGGCCG CGTTGGAGGC GCGTCTGGGG GACCTCGATC GCGACCTCGA CGGCCATCTG
ATGGGCCTGC CCAATATCCT GGACGACGGC GTTCCCGAAG GCCCCGACGA AAGCGCCAAT
GTCGAGGTGC GCCGCTGGGG AACGCCGCGC GCCTTCGAGT TCACCCCGCG TCAGCATTTC
GAGATCGGCG AGAGCCTGGG CGGCATGGAT TTCGAGGCCG CCGCCCGGCT GTCGGGGGCG
CGCTTCGTCG TGCTCAAGGG GCAGATCGCC CGCTTGGAAC GCGCCCTTGG CCAGTTCATG
CTGGATCTGC ACATCACCGA GCATGGCTAT CAGGAGGTGC AGACCCCGGT TCTGGTCCGC
GCCCCGGCCC TGCAGGGAAC CGGCCAGCTG CCCAAATTCG CCGAGGATCT GTTCCGCGTC
GAGGGGGATT TCTTCTTGAT CCCGACGGCC GAGGTCACCG TGACCAATCT GGTCGCCGGG
CAGGTGCTCG CCGCCACGGC CCTGCCGTTG CGCATGACCG CCTTCACCCA GTGCTTCCGC
TCGGAAGCCG GGGCGGCGGG CAAGGATACC CGGGGCATGA TCCGCCAGCA CCAGTTCGAG
AAGGTCGAGA TGGTGTCGAT CGTCCATCCC GACGACTCGG CGGCCGAACT GGAGCGGATG
ACCGCTTGCG CCGAGGATGT GCTCAAGCGC CTGGAGCTGC CTTATCGGGT GATGGCGCTC
TGCGCGGGCG ATGTCGGGTT CAGCGCCCGC CAGACCTATG ACCTGGAGGT CTGGCTGCCC
GGCCAGGACC GCTACCGGGA AATCTCGTCG TGCTCCAACA CGGGCGACTT CCAGGCGCGG
CGGATGAATG GCCGCTTCAA GGTCGAGGGC GAGAAGGGCA CGCGCTTCGT TCACACGCTC
AATGGCTCGG GCGTGGCCGT GGGCCGCTGT CTGGTGGCGG TGCTGGAGAA TTATCAGAAC
GCCGATGGCA CGGTGAGCGT CCCCGAGGCC CTGCGCGGCT ATATGGGCGG ACTTGAGCGG
TTGGGGGACT GA
 
Protein sequence
MHDLKAIRET PEAFDLALAR RRLEPRSALV LDLDSQRRAV QTELNDLQAR RNEASKRIGL 
VKKEGGDAQA LVDEVAGIKA TMAALEARLG DLDRDLDGHL MGLPNILDDG VPEGPDESAN
VEVRRWGTPR AFEFTPRQHF EIGESLGGMD FEAAARLSGA RFVVLKGQIA RLERALGQFM
LDLHITEHGY QEVQTPVLVR APALQGTGQL PKFAEDLFRV EGDFFLIPTA EVTVTNLVAG
QVLAATALPL RMTAFTQCFR SEAGAAGKDT RGMIRQHQFE KVEMVSIVHP DDSAAELERM
TACAEDVLKR LELPYRVMAL CAGDVGFSAR QTYDLEVWLP GQDRYREISS CSNTGDFQAR
RMNGRFKVEG EKGTRFVHTL NGSGVAVGRC LVAVLENYQN ADGTVSVPEA LRGYMGGLER
LGD