| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1764 |
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| Symbol | |
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| ID | 3835186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2056240 |
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| End bp | 2057706 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637825861 |
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| Product | SecD export membrane protein |
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| Protein accession | YP_426851 |
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| Protein GI | 83593099 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00179292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCT TGTTCAGTCT GTGGAAAGCC ATTCCGGTGA TCCTGGTCGT TCTGGCCGGG
ATCACCTTTT CTTTAGCCAA TGTGGTTCCC GGGGCGGGCG AGGGTGGCTT GCGCTGGTGG
CGACCGCTTT CCCTGGGGCT TGACCTCAAG GGCGGCAGCA CCTTCCTGAT CGACCTTGAC
GCGCCGGCCC TGGTCCATGA GACCCAGGTG GCGCTGGCCG CCAGCGCCGG CGCCGCCCTG
CGCGGCGAAC GCATCGGTGG AGCGGCCAAT CTGGGCGAGG ACGGGGCGGT GGTCGTCGAT
ATCGCCGATG CGGGCCAGCG CGCCGCGGCG CTGCGGCTGT TGCGCGGGCT TGAAGCCGGA
ACCGAGGCGG AGATCACCCC CGCCGGGGCC ATCCGCCTGA CCTTTACCGC CATCGCCCAG
GCCGAGCGCA CCGACCGCAT GGTCGCCCGC GGCCTGGGAG TGCTGCGCCA GCGTCTGCGT
GAGGCGGGCC TCAGCGAAAT CCGTCTGGAA CGGCGCTCCG ACCGCCGCAT CCTGGTCGCC
TTGCCCGGAT TGGACGACTC GGAGCGGGTG AGGGACCTGC TATGGCGGCC GGCGCGGTTG
TCGATCCGGG CGGCGAATGG CGAGGGGGGA ACGATCGACG GCGATCGGCT GACGAGCGCC
CAGGCGACGG TTCAGAACGG CAAACCTTTG ATCAGCCTGC GCTTTGATGG CGTCGGCGAG
CGACGCATCA TCCAGATGCG CGGCGGCGAG GGCGGCGAGC GCGGACTTGA GGCGACGATT
GACGGCGAGG CGGTGGCCGT CCGCCTTCTG CGCCAGCCCG GATCGGGGGG CATCGGCCTT
TTGCTCGATG GCGCCTTTTC CACCCGCGCC GCCCAGGATC TGGCCCTGAT GCTGCGCGTT
GGCGCCCTGC CCACGCCCTT TCGGATCGTC GAGGAACGCA CCGTCGGCCC CAGCCTGGGC
GCCGATCGCG TCGCCGCCGG CGCCTTGGCC AGCGCGGCGG GGGCTTTGGC GGTGACCGTC
TTCCTGATCG CCGTCTATGG TTTGTTCGGG GTTTTCGCCA CCATCGCCCT TGGTCTTAAT
TTCTGCCTGC TGTTTGGCAT GCTATCGGGG CTGGGGGCGA CGCTGACCTT GCCCGGCATC
GCCGGCATCG CCCTGACCAT CGGCATGGCG GTGGACGCCA GCGTGCTGAT CTTCGAGCGC
ATCGGCGAGG AGGCCCGCGC CGGGCTGGCG GTGGACGAGG CGCTGCGGGC GGGCTTCGGC
AAGGCCTTTT CGGCCGTGCT GGACGCCAAT ATCCTGACGC TGGGCGTTGG CGCCTTGCTA
TTTTGGCTGG GCGGCGGACC GGTGCGGGGA TTTGCCGTCA CCCTGACGCT GGGGGCCGTG
AGCGCCCTGT TCACGGCGAT GCTGCTCAAC CGACTGATCG TCGCGCTCTG GCTGCGTCTG
GCGCGGCCGA AAACCATTCC CCTTTAA
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| Protein sequence | MPALFSLWKA IPVILVVLAG ITFSLANVVP GAGEGGLRWW RPLSLGLDLK GGSTFLIDLD
APALVHETQV ALAASAGAAL RGERIGGAAN LGEDGAVVVD IADAGQRAAA LRLLRGLEAG
TEAEITPAGA IRLTFTAIAQ AERTDRMVAR GLGVLRQRLR EAGLSEIRLE RRSDRRILVA
LPGLDDSERV RDLLWRPARL SIRAANGEGG TIDGDRLTSA QATVQNGKPL ISLRFDGVGE
RRIIQMRGGE GGERGLEATI DGEAVAVRLL RQPGSGGIGL LLDGAFSTRA AQDLALMLRV
GALPTPFRIV EERTVGPSLG ADRVAAGALA SAAGALAVTV FLIAVYGLFG VFATIALGLN
FCLLFGMLSG LGATLTLPGI AGIALTIGMA VDASVLIFER IGEEARAGLA VDEALRAGFG
KAFSAVLDAN ILTLGVGALL FWLGGGPVRG FAVTLTLGAV SALFTAMLLN RLIVALWLRL
ARPKTIPL
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