| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1763 |
|---|
| Symbol | |
|---|
| ID | 3835185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2055169 |
|---|
| End bp | 2056224 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637825860 |
|---|
| Product | protein translocase subunit secF |
|---|
| Protein accession | YP_426850 |
|---|
| Protein GI | 83593098 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.670148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGTC CCTTCGCCCG ACTGACCGCC GACTTCCACT ATGATTTCCT TGTCAGCCGC
GCGCGGGTGA TGGCGGCTTC GGCGGCGCTG CTCCTCGTCT GCCTGCTCGC CCTTGGCCTG
CGCGGCCTGG ATCTGGGCAT CGATTTCACC GGCGGGCTGG TGGTCGAGGC GCGGACGGCG
ACGGCGATGG ACCCGGTCGA CCTGCGCCAG AGCTTGCGGG CGAGCGTCGT CGGCGAGGTC
GACGTGACCA CCTATGGCGA GGATGGCCGT AGCGTCACCG TGCGGGTCGG CCGCCAGACC
GGCGGCGATC AGGCCATGCT GCAGGCCCTG GAGGGGGTCA AGACGGCTTT GGGAGAGGGG
GCGACCTATC GCAGGACCAA TCTGGTCGGC CCGACCGTGG GCGGCGAGGC GACGATCGCC
GGGCTGCTGA CCGTCGCCCT CGCCCTGGTG CTGATCGCGG CCTATGTGTG GCTGCGCTTC
GACTGGCATT ACGCCCTGGG CGTCGTCCTT GCCCTGAGCC ATGACGTGGT CGCCGTGCTT
GGCCTTTACG CCCTGTTTCA GATCCCCTTC GATCTGACCA GCATCGCCGC CTTGCTGACG
GTGGCCTGCT ATTCGATCAA CGACACGGTG GTGATCTTTG ATCGGGTGCG CGAGGAACTG
GCCCTTACCC CCGACGCCCC GCTGGCCACG GTGGTCAACA AGTCGATCAA TCGCACCCTG
GCCCGCACCA TCGTGCTGTC GGGCAGCACC CTGGTCACCA TGGCCTGCCT CGCCCTGCTC
GGCGGGCCGC AGTTGCGCGG CTTCGCCCTG GCGCTTATCT GGGGAACGGT GGTCGGCACG
CTGTCGTCGA TCTATGTCGC CGTTCCGGCG CTGATGGCCT TTCGCGGCCG CTCCAAGACG
GCGGACGACG GTCGGGAGGG CGAGGACGAC GGGGAGGATA CTCCTCCGCC CCGCGCCGCC
CCGGGCAAAG CCAAAAACGC CCCCGCCGTC GCCGCCGGGA AACCCGCCCA GGCCAAGCCC
GCCGCCGCTC CGCCGTCCCG CAAGGAACGC CGCTAA
|
|---|
| Protein sequence | MPRPFARLTA DFHYDFLVSR ARVMAASAAL LLVCLLALGL RGLDLGIDFT GGLVVEARTA
TAMDPVDLRQ SLRASVVGEV DVTTYGEDGR SVTVRVGRQT GGDQAMLQAL EGVKTALGEG
ATYRRTNLVG PTVGGEATIA GLLTVALALV LIAAYVWLRF DWHYALGVVL ALSHDVVAVL
GLYALFQIPF DLTSIAALLT VACYSINDTV VIFDRVREEL ALTPDAPLAT VVNKSINRTL
ARTIVLSGST LVTMACLALL GGPQLRGFAL ALIWGTVVGT LSSIYVAVPA LMAFRGRSKT
ADDGREGEDD GEDTPPPRAA PGKAKNAPAV AAGKPAQAKP AAAPPSRKER R
|
|---|
| |