Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1750 |
Symbol | |
ID | 3835172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 2041650 |
End bp | 2043008 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637825847 |
Product | inner-membrane translocator |
Protein accession | YP_426837 |
Protein GI | 83593085 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.40589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAAG CTCCCCTCAA CGCCAAAGCC GGCGCTGGCG CCGGCGGGTT GCAGATCGGC TGGGTGAACG TTCCCAAGCT GATCAAGGAA TCCCTGATCA CCGCCGCCCT GGCCGCGGTC TTGTTCCTGC CCTTCATCGC CCTTCACGCC ACCAGCTCGG GCGCCGGGCT GTTCATCGAG CAGCGCTGGG AGACCTGGGG CTGGTCGGTG CTGACGGTGT TTATCGGCCG CATCGCCCTG GTCATCTGGC GCGACAATCC GTCCAACCGC CTGCACGACG CCCTGCTCAA GAGCGTGGTC ATGCCCGTTG GCGGCTTCTT CCGCCGCAAC ATGGCCTTCA TCGGTCTGGC CGCCCTGGTT CTGGCCATCG TTTTTCCGAT CACGCCGTTT AGCAATCGCT ATTATGTCGA TGTCGCCACC ACCTGGATGA TCTACATCAT GCTGGGCTGG GGGCTGAATA TCGTTGTCGG TCTGGCCGGG CTTCTCGATC TCGGCTATGT CGCCTTCTAT GCGGTCGGCG CCTATTCCTA CGCCCTGCTG TCGCAGACCT TCGGCTGGTC GTTCTGGGTC TGCCTGCCGC TGGCCGGCGT TTTCGCCGCC TTCTTCGGCG TCGTCCTCGG CTTCCCGGTC TTGCGGTTGC GCGGCGATTA TCTGGCCATC GTCACCTTGG GCTTTGGCGA GATCATCCGC GTCGTCTTGC TGAATTGGTA CGCGGTGACC AACGGTCCCG ACGGCATCAG CGGCATCGAG CGTCCCAGCT TCTTCGGCCT GGATTTCGCC CGGACCGCGC CCGAGGGCGG CGAGACCTTC CACCAGTTCT TCGGCATCTC CTATTCGCCC GACCACCGGG TGATCTTCCT GTTCTATCTG ATCCTGGCCC TGGCGGTTCT GACCAACATC TTCACCGGGC GCATCCGCCG GCTGCCGGTC GGCCGGGCCT GGGAAGCCCT GCGCGAAGAC GAGATCGCCT GCCGTTCGCT GGGCATCAAC CCGACCAACG TCAAGCTGTC GGCCTTCGCC CTCGGCGCCA TGTTCGGCGG TTTCGCCGGA TCGTTCTTCG CTACCCGCCA GGGCTTCATC AGCCCGGAAA GCTTCACCTT CATGGAAAGC GCGGTGATCC TGGCGATCGT CGTTCTCGGC GGCATGGGAA GCCAGATCGG CGTGGTCATC GCCGCCTTCT TCCTGGTGGT GTTGCCCGAG GTGTTCCGCG AGTTCGATCA GTTCCGCATG TTCTTCTTCG GCGCGGCGAT GGTCGCGGTG ATGGTTTGGC GGCCGCGCGG CCTGCTGTCG TACCGCGATC CGACCATCCT CTTTGAGAAG ATCAAGCACA GGCTTGCCAA GCAGGGGGGC AAGGCATGA
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Protein sequence | MAQAPLNAKA GAGAGGLQIG WVNVPKLIKE SLITAALAAV LFLPFIALHA TSSGAGLFIE QRWETWGWSV LTVFIGRIAL VIWRDNPSNR LHDALLKSVV MPVGGFFRRN MAFIGLAALV LAIVFPITPF SNRYYVDVAT TWMIYIMLGW GLNIVVGLAG LLDLGYVAFY AVGAYSYALL SQTFGWSFWV CLPLAGVFAA FFGVVLGFPV LRLRGDYLAI VTLGFGEIIR VVLLNWYAVT NGPDGISGIE RPSFFGLDFA RTAPEGGETF HQFFGISYSP DHRVIFLFYL ILALAVLTNI FTGRIRRLPV GRAWEALRED EIACRSLGIN PTNVKLSAFA LGAMFGGFAG SFFATRQGFI SPESFTFMES AVILAIVVLG GMGSQIGVVI AAFFLVVLPE VFREFDQFRM FFFGAAMVAV MVWRPRGLLS YRDPTILFEK IKHRLAKQGG KA
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