Gene Rru_A1724 details

Gene Information

• Locus tag: Rru_A1724
• ID: 3835145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 2017171
• End bp: 2017848
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637825820
• Product: ThiJ/PfpI
• Protein accession: YP_426811
• Protein GI: 83593059
• COG category: [R] General function prediction only
• COG ID: [COG0693] Putative intracellular protease/amidase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCC TGATGGTACT GACGTCCCAC GATCAATTGG GCGACAGCGA GCATAAGACC 
GGCTTCTGGC TTGAAGAAGT CGCCGCGCCT TATTACGCCT TCCTTGATGC CGGGGCCGAA 
GTCACCTTGG CCTCGCCCAA AGGGGGGCAG CCGCCGCTTG ATCCGCGCAG CGATGACGCC 
GGTGCCCAGA CCGCCAGCAC CGCCCGCTTC AAGGCCGATG TCGCCGCCAC CGCCGCCCTG 
GCCCATACCC AGCTTCTGGC CGAGGTCTCG GCGCAGGACT ACGACGGCGT GTTTTATCCC 
GGCGGGCACG GCCCCTTATG GGATCTGGCC GAGGATCCGA CCTCGATCGC CCTGATCGAA 
GCCTTCGTCG CCGCCGACAA GCCGGTGGCG GCGGTCTGCC ACGGTCCGGC CGCCCTGCGC 
CACGTCAAGG TCGGGGGAAC CGTGCCTTTG GTCGAAGGCA AGCGGGTGAC CGGCTTTTCC 
AACAGCGAGG AGGATCAGGT CGGGCTGGCC AAGGTGGTGC CCTTCCTGAT CGAAGACGAG 
TTCAAACGCC TGGGCGGCCA TTATGAAAAG GCCGACGACT GGCAAAGCTT CGTCCTGACC 
GACGGCCTGC TGGTCACCGG GCAGAACCCC GCCTCGTCGG AGGAGTCCGC CCGGGCCTTG 
TTGTCCCTGC TGGCTTAG 

 

Protein sequence

MKILMVLTSH DQLGDSEHKT GFWLEEVAAP YYAFLDAGAE VTLASPKGGQ PPLDPRSDDA 
GAQTASTARF KADVAATAAL AHTQLLAEVS AQDYDGVFYP GGHGPLWDLA EDPTSIALIE 
AFVAADKPVA AVCHGPAALR HVKVGGTVPL VEGKRVTGFS NSEEDQVGLA KVVPFLIEDE 
FKRLGGHYEK ADDWQSFVLT DGLLVTGQNP ASSEESARAL LSLLA