Gene Rru_A1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1709 
Symbol 
ID3835130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2002802 
End bp2003296 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content62% 
IMG OID637825805 
ProductPilT protein-like 
Protein accessionYP_426796 
Protein GI83593044 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGCT TTGAGCGCGC GGGATATCGA GCTTTGAGCG GCTTCCTTCT CGACACCAAC 
ATCGTCTCCG GGCTGGCGCC GTCGAAGTTG GAAGCATCCG CTGACTTCCT CACCTGGCTG
GACCGCATGG ATGCCGATGG CCGGATATTT CTGTCGGTCG TCTCCATCCA TGAGATCGAG
AAGGGAATCG CGCTCCTTGA GCACAAGGGG GCAACGGCAA AGGTCGCGAG CCTGAAGGCA
TGGCTCAGTG GCCTTGTCTC CATGTACGAC GACAAGATCA TTAGCTTCGA TGCGCAGGCT
GCCGCGATCG GGGGGCAGTT GGAAGCGAAG GCGCTCGCGG CCGGCCATGA TCCCGGCATG
GCCGATGCCG TTATCGCCGG CATCGCTGCA GCGCATGAAC TCGTCGTTGT CACCCGCAAC
ACGAAGCACT TTCTGCCGTT CGGTATCGCC GTGTTGTCGC CTGACGAGGC CGCTACCAAG
GGGGGCCCGG CATGA
 
Protein sequence
MSSFERAGYR ALSGFLLDTN IVSGLAPSKL EASADFLTWL DRMDADGRIF LSVVSIHEIE 
KGIALLEHKG ATAKVASLKA WLSGLVSMYD DKIISFDAQA AAIGGQLEAK ALAAGHDPGM
ADAVIAGIAA AHELVVVTRN TKHFLPFGIA VLSPDEAATK GGPA