Gene Rru_A1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1661 
Symbol 
ID3835080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp1953505 
End bp1954200 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID637825755 
Productextensin-like 
Protein accessionYP_426748 
Protein GI83592996 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.694438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCAG GGTACGCGGT TTTGCTGGGG GTCTTGGCGC TGATCGGCAC GGTGGTTCCC 
CTCCATCAGT CGTGGATCCG GCTGCCGCCG AATATTCTGC CCTGGGCGCC GATCACCCTC 
GATGCGCCGC CGGGCCCCCT CGCCCGCTTT CACATCAACG CCCTCACCAC CGATGGGCCG 
GCCTGCCTTA ACGCCCTTGA TCGCTCGGAC CTGTCCTATC GCCGGCTGGC CGAGCGGCCG 
CTCAACGCCG GCTGCGGACT GGAAACCGGG GTCCGCCCCC TGCGCTCCCA GGTCACCTAT 
AACGGCTCGT TCCAGGCGAC CTGCGCCCTG ATGGCCGCCC AATATTGGTA CGAGGGCGTC 
TTGCGCACCC TGGCCCTGCG CCATTTCGCC AGCCCGCTGG TCCGCATCGA CCATCTGGGC 
ACCTATGCCT GCCGCAATAT CAACAGCCGG CCCGAGGGCC GCCGCAGCCA GCATGCCACC 
GCCAATGCCA TCGACATCGC CGCCTTCCAT CTGGAGAACG GCGAAAGCAT CGTGATCCGC 
CGCGATTGGG GCAAGCCAAC CGCCAAGGGA CTGTTCCTTG CCGAGGCCCG CGATGCCGCC 
TGCGGCTTGT TCAACGCCGT CCTCGGCCCC GCCTATAACG CCGCCCACGC CGATCACTTC 
CACCTTGATC TCGGCCGCTT CCGCGTATGC CGCTAG
 
Protein sequence
MRAGYAVLLG VLALIGTVVP LHQSWIRLPP NILPWAPITL DAPPGPLARF HINALTTDGP 
ACLNALDRSD LSYRRLAERP LNAGCGLETG VRPLRSQVTY NGSFQATCAL MAAQYWYEGV 
LRTLALRHFA SPLVRIDHLG TYACRNINSR PEGRRSQHAT ANAIDIAAFH LENGESIVIR 
RDWGKPTAKG LFLAEARDAA CGLFNAVLGP AYNAAHADHF HLDLGRFRVC R