| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1607 |
|---|
| Symbol | |
|---|
| ID | 3835024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1898895 |
|---|
| End bp | 1901081 |
|---|
| Gene Length | 2187 bp |
|---|
| Protein Length | 728 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637825699 |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_426694 |
|---|
| Protein GI | 83592942 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1640] 4-alpha-glucanotransferase |
|---|
| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG GCACCCCCGG AGTATTGAGG GTTCTTGCGG AACGGGCAGG GGTTATCGAC
CGCTGTTATG ATGCTTTCGG ATCGTTGATG GTCGCCCCCG ACGCGGCGCT GAAGGCGGCT
TTGGCGGCTT TGGGCTGGCC GGCGGAGGAC GAGGCGCAGG CGGCGCGGTC GCTGGCCGCC
CTTGAGGCCG CCCCCTGGGC CGAGGCGCTG CCGCCTTGCG TCATCCATCG CCTGGGTGAC
ACGCCCGCCG TCCTGACGGT GCCGGTGGTG ACGACGGGCG ACTCGTTTGG CCCCGGCCGC
TGGAGTCTGA CCCCCGAGGA GGGAGCGCAA GCCCTACCGG CGACCGGGAC CTTCGATCCA
CAAAGCCTGA CGGTCGAGGA GTCGGGGCCG GAGGGTAAGA CACGGCGCCG CCTTGACCTC
GGCCTCGATC TGCCGATGGG GTATCATCGC CTGCGCGTCG AGGGACTTGC CCCGACGGCG
CTGGAGACCG TGCTGATCGT CGCGCCCAGG CGCTGTTGGC TGCCCGAGGG CTGGGAAGAC
CGCGAGGGGC CGCGTTTGTG GGGCGTGGCG ACCCAGGTTC ATGGCCTGCG CAGTCTCAAC
GACTGGGGAA TGGGCGATTT CGACTCGTTG GCCGTGCTGG CGCGGCTGAC CGGCCGCCAG
GGCGGTGATC TGTTGGGCGT CAGCCCGCTT CACGCGCTGT TTCCGGCCCG CCCGCTTCAT
GCCAGCCCCT ATTCGCCCAA CTCCCGGCTG TTCCTCAATC CGCTCTATAT CTCGATCCCC
AGCGTTCCGG AATACGACCT CAGCCCCGAG CTTGCCGCCT TCACCAACGA TCTCGGCGCC
CTTCAGCAGC CCGAACTGAT CGATCTCGCG GCGGTCGCCG AGGGCAAATG GTCGGCTTTG
GCCATTCTTC ACCGGCGTTT TGTCGCCCAG CACCTCGGAC GGCGGACGCC GCGCGGCCAA
GCCTTTACCG CCTTCCTGAA AGAGGGCGGG GAGCACCTTG AAAAATTTGC CATTTTCCAG
ACCCTGTCCG AGCACTTCAA GGAGAGGGGG TGGTCGTGGC GCGACTGGCC GGCTGAGTTT
CACGATCCGG CGGCGCCGGC GGTGGCCGCG TTCGCCGGCG AGCAGGCGGC CCGGGTGCTG
TTCCATCAAT GGTGCCAGTT CGAGGCCGAT CGCCAATTGG CGCTGGTGGC CAAGGCTGCG
GCCGATGCCG GTCAGCGCGT CGGGCTGTAC CGCGACCTCG CCCTGGGGTC CGATCCCACC
GGCGCCGATT GCTGGGCCCT GCGCGGGGTC ATGGCCGAGG GGTTGTCGGT GGGCGCCCCC
CCCGATCCGT GGAACGCCAA GGGCCAGAAC TGGGGATTCC CGCCCTTTCA CCCCGGCCAC
CTGCGCCAAG CCGCCTATCA GCCCTTCGCC CGGATGATCC GCGCCAATAT GCGCGAGGCC
GGGGCCCTGC GCATGGATCA TGTGCTGGGG CTGATGCGGC TGTTTTGCAT TCCCTGGGGG
ATGGAGGGCC GCGAGGGCTT CTATCTGAGG ATGCCCTTCG AGGATCTTCT GGCCGTTCTC
GCCCTGGAAA GCCACCGGGC GCGCTGCATC GTCGTTGGCG AAGATCTGGG CACCGTGCCC
GACGGCTTCC GCGATCGCAT GCGCGAGGCG GCGGTGCTGT CTTATCGGTT GTTCTTCTTT
GAACGGGGCC ACGATCAGGC GCTGACCCCC CCGGAAGCCT ATCCCCGCTT GGCCACCGTC
GCCGCGTCGA CCCATGATCT GCCGACCCTG GCCGGGTTCT GGGCCGGGCG CGATCTGGCG
TGGAAAAACG ACCTCGATCT GTTTCCCTCC GAGCAGGCGC GCAACGCCGA AAGCATGGAT
CGCCACAACG ATCGGCCGCG AATCCGCGCG ACTCTGGCGG CGGCGGGAAC GCCGCTGTCT
GACCCCGGGA CCTTCACGCC CCCCCCCGAA CTGGTGCCGG CGGTGACGGC GTGGCTGGCC
CGCACCCCCA GCCTTATTCT CATGCTTCAA ATTGAAGACG TGCTGGAAAT GCCCGAACAG
GCCAATATGC CGGGAACCAT CGATCAGCAT CCCAACTGGC GCCGACGAAT TCCGCTGGCG
GTGGAGGCTT TGGAGGTGGA CGGAAGGCTG GGCCGTCTGG CATGTATCCT GGCGTCCCAC
GGACGGGGGG CGGCAGCAAA AAGGTAA
|
|---|
| Protein sequence | MTDGTPGVLR VLAERAGVID RCYDAFGSLM VAPDAALKAA LAALGWPAED EAQAARSLAA
LEAAPWAEAL PPCVIHRLGD TPAVLTVPVV TTGDSFGPGR WSLTPEEGAQ ALPATGTFDP
QSLTVEESGP EGKTRRRLDL GLDLPMGYHR LRVEGLAPTA LETVLIVAPR RCWLPEGWED
REGPRLWGVA TQVHGLRSLN DWGMGDFDSL AVLARLTGRQ GGDLLGVSPL HALFPARPLH
ASPYSPNSRL FLNPLYISIP SVPEYDLSPE LAAFTNDLGA LQQPELIDLA AVAEGKWSAL
AILHRRFVAQ HLGRRTPRGQ AFTAFLKEGG EHLEKFAIFQ TLSEHFKERG WSWRDWPAEF
HDPAAPAVAA FAGEQAARVL FHQWCQFEAD RQLALVAKAA ADAGQRVGLY RDLALGSDPT
GADCWALRGV MAEGLSVGAP PDPWNAKGQN WGFPPFHPGH LRQAAYQPFA RMIRANMREA
GALRMDHVLG LMRLFCIPWG MEGREGFYLR MPFEDLLAVL ALESHRARCI VVGEDLGTVP
DGFRDRMREA AVLSYRLFFF ERGHDQALTP PEAYPRLATV AASTHDLPTL AGFWAGRDLA
WKNDLDLFPS EQARNAESMD RHNDRPRIRA TLAAAGTPLS DPGTFTPPPE LVPAVTAWLA
RTPSLILMLQ IEDVLEMPEQ ANMPGTIDQH PNWRRRIPLA VEALEVDGRL GRLACILASH
GRGAAAKR
|
|---|
| |