| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1582 |
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| Symbol | dnaE |
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| ID | 3834999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1861842 |
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| End bp | 1865354 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637825674 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_426669 |
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| Protein GI | 83592917 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGATC CATCCCCCGC TTCGTCCGCC CTCGCCGGCG GCTCCCCCGC GAATGGCTTT
GTCCATCTGC GGGTTCACAC CGCGCTCTCG ATGTCCGAGG GGGCGATCCA GGTCAAGGCG
CTGGTTAAGC TCTGCGCCAA GATGGGAATG CCCGCCGTCG CCATCACCGA CAGCGGCAAT
CTGTTCGGCG CCCTTGAGCT TTCGGTTACG GCCTGCGACA TGGGCGTTCA GCCGATCATC
GGCTGCCAGA TCGCCGTGCG CAACGAAGAG GTGCGCGAGC GCGGATTTGG CGCCGGGCGC
GATCTGCGTG CGCCCGATCC CGATGCCGTG GTGCTGCTGG CCAAGAACGC CAGCGGCTAT
GCCAATCTGA TGAAGATCGT CTCGCGCTCC TTCATCGAAG GCGACGGCAG CGAGGCGCCC
CAGGTGCGGC TGGCCGATAT CGAGGCCCTG AACGACGGGC TGATCTTGCT GACCGGCGGC
GTTGGCGGGC CCTTGGGGCG GCTGCTGCGC GAGGGCCGGC GCGACGAGGC CGCCGCCATC
CTCGCCCGCC ACAAGGAGCA TTTCGGCGAC CGCGTCTATG TCGAGATCCA GCGCCATGGC
ATGGCCGATG AAGACCGCAT CGAAGCCGAT CTGATCGATC TGGCCTATGC CCAAAACGTC
GCGCTGGTCG CCACCAACGA GCCCTATTAC CCCGACCGCG CCATGTTCGA AGCCCATGAC
GTGCTGATCT GCATGCAGCA GAAAACCGTC ATCGGCGATG AGACCCGGCG GCGGCTGACC
CCTGAGCATT ATTTCAAGCC GGCCAACGAG ATGCGGGCCT TGTTCGCCGA TCTGCCCGAG
GCGGTGGACA ACACCCTGGT GATCGCCAAA CGCTGCGCGG TGATGAGCGA GAAGCGCAAG
CCGATCCTGC CCCACAGCCC GGCGGTCAAG GGGCGGACCG AAGCCGAGGC GCTTTGCGCC
ATGGCCGAGG AAGGCCTGGA TAAGCGCCTG GAAAAGCACG TTTATCGCGA AGGCATGAGC
GAGGCCGAGC GGATCGAGAT CGCCAAGCCC TATCGCGAGC GCCTAGCCTA TGAGCTTGAT
GTCATCATCA AGATGGGCTT CCCCGGCTAT TTCCTGATCG TGGCCGATTT CATCCAATGG
GCCAAGGACG CCGATATCCC GGTGGGTCCG GGGCGTGGGT CGGGGGCGGG ATCGTGCGTG
GCCTGGGCCC TGACCATCAC CGACCTTGAC CCCTTGCGCT TCAGCTTGCT GTTCGAGCGG
TTCTTGAACC CCGAACGCGT GTCGATGCCC GACTTCGATA TCGACTTCTG CCAGGACCGC
CGCGAAGAGG TCATCCGCTA TGTTCAGCGG GAATACGGCT ATGAGCGCGT CGCCCAGATC
ATCACCTTCG GCAAGCTGCA GGCCCGCGCC GTGCTGCGCT CGGTCGGCCG TGTCTTGCAG
ATGCCGCTCG GCTATGTCGA TAAGATCTGC AAGATGGTGC CCAATAATCC GGCCGCGCCC
GTCACCCTCA AGGAAGCCAT CGAGGCCGAG CCCCAGCTGC GCGATCTGCA GAAAAACGAC
GAGATGGTCG CCCGCCTGCT TGATATCGGC ATGAAGCTGG AGGGGCTCTA TTCCCACGCC
TCGACCCATG CGGCGGGTGT GGTGATCGGC GATCGTCCCC TTGATAATCT GGTCGCGCTC
TACCGCGATC CCCATTCCGA TATGCCCGTC ACCCAGTTCA ACATGAAATG GGTGGAGCAG
GCCGGTCTGG TGAAATTCGA CTTCCTCGGC CTGAAAACGC TGACGGTCTT GCAGCATGCG
GTGCGCCACA TCGCCAAGCG CGGCATCACC GTCGATCTGC TTGACCTGCC TTTGGATGAC
CGCCGGAGCT ACGACATGCT GGGGCGCGGC GAGACCAGCG GCGTCTTCCA GCTTGAAAGT
ACGGGGATGC GCGACGTTCT GCGCAATATG AAGCCCGATA CCCTGGAAGA CATCGTCGCC
ATTGTCGCCC TCTACCGCCC GGGGCCGATG GACAATATCC CCAGCTACAT CAAGCGCAAG
AAGGGCGAGG AAGAGGTTGT CTATCTTCAT GATTCCCTAG AGCCGATCCT CAAGGAAACC
TATGGCATCC TGATTTATCA GGAACAGGTG ATGCAGGCGG CCCAGATCAT GGCCGGCTAT
TCCCTGGGCG GCGCCGATCT GCTGCGCCGG GCCATGGGCA AGAAGATCAA GGCCGAGATG
GATACCCAGC GCGCCCTGTT CGTCGAAGGG GCGGGCAAGC GCGGCACCTC GGAGGCCAAG
GCCTCGGAGG TTTTCGACCA GATCGCCAAA TTCGCCGGCT ATGGCTTCAA TAAATCCCAT
GCCGCCGCCT ATGGGCTGGT CGCCTATCAA ACCGCCTATC TGAAGGCCAA CTACCCCGTC
GAGTTCATGG CCGCCACCAT GACCTATGAC ATGCACAACA CCGACAAGCT GGCTGTTTTT
AAAGGGGAAT TGCGCCGCCT TGATATCCCC TTGCTGCCGC CGGACGTCAA TCGCTCCTTT
GCCGTTTTCG GCGTCGAGGA CGGCGCGGTG CGCTATGCCC TGGGCGCGGT CAAGAACGTC
GGCGCCGCGG CGATGGACGC CCTGGTCGCC GAACGCGAGG CCCGGGGACC GTTCAAGGAT
CTGGCCGATT TCGCCCGTCG CCTGGATGGC AAGGTCATCA ACAAGCGTCT GCTCGAAAAC
CTGATCAAGG CCGGGGCGCT TGATAGCCTT GATGGCGATC GCGCCAAGCT GCTGGCCAAT
GCCGATGTGC TGATGCGCCA CGCCCAGGCC GCCGCCGAGG ATCGGGCGTC CAACCAGTCG
AGCCTGTTCG GAGGGGCCGG GGCGACCTCG GAACCGCCGA TGAAATTCCG CGCTTGCGCC
GCCTGGACCA TCACCGAGAC CCTGGCCCAT GAACGCGACG CCATGGGCTT CTATTTGTCG
GCCCATCCCT TGGACATCTA TGGCGACAGC CTGGAGCGCC TGGATGTGGT GCCGATCGAG
ATGCTGCCCG GCCATCTGCG CGGCGGCGGC AGCGGCGCGG TCAAGCTGGC GGTCACCCCC
GGCGCGCGCA AGGAGCGCAT CGGCAAAAGC GGCAGCCGCT ACGCCTTCGT CGAATTATCC
GACGCCACCG GCTCGTGCGA GACCATGGTG TTTTCCGAGG TTTTGGGGGC CAGCCGCGAG
TTGCTCGATT CCGGCCGGCC GTTGCTGGTC CGCGCCGACG CCCGGCTCGA GGGCGAAGAG
GTGCGGTTGC TCGCCCAAGC GATCGAACTG CTCGACGACG CCGTCGCCCG CGCCGCCCGC
CGCATCAAGG TGTCGTTTAG CGACAGCGGA CCGATCCCGC GGCTGGCCGA GATCATCCGC
GCCGATGGCC CGGGCAATCG CAATATCCTG TTGGTCGCCG ATCTTGGCGA TCGCGAGGTG
GAGTTCCGCT TGGACGGTGG CTTCGCCCTG CGCTCGGAAA CCCTGGCCGC CTTGCGCAAT
GTGCCCGGCG TGGGCGAGGT GCGCGAGGTT TAG
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| Protein sequence | MPDPSPASSA LAGGSPANGF VHLRVHTALS MSEGAIQVKA LVKLCAKMGM PAVAITDSGN
LFGALELSVT ACDMGVQPII GCQIAVRNEE VRERGFGAGR DLRAPDPDAV VLLAKNASGY
ANLMKIVSRS FIEGDGSEAP QVRLADIEAL NDGLILLTGG VGGPLGRLLR EGRRDEAAAI
LARHKEHFGD RVYVEIQRHG MADEDRIEAD LIDLAYAQNV ALVATNEPYY PDRAMFEAHD
VLICMQQKTV IGDETRRRLT PEHYFKPANE MRALFADLPE AVDNTLVIAK RCAVMSEKRK
PILPHSPAVK GRTEAEALCA MAEEGLDKRL EKHVYREGMS EAERIEIAKP YRERLAYELD
VIIKMGFPGY FLIVADFIQW AKDADIPVGP GRGSGAGSCV AWALTITDLD PLRFSLLFER
FLNPERVSMP DFDIDFCQDR REEVIRYVQR EYGYERVAQI ITFGKLQARA VLRSVGRVLQ
MPLGYVDKIC KMVPNNPAAP VTLKEAIEAE PQLRDLQKND EMVARLLDIG MKLEGLYSHA
STHAAGVVIG DRPLDNLVAL YRDPHSDMPV TQFNMKWVEQ AGLVKFDFLG LKTLTVLQHA
VRHIAKRGIT VDLLDLPLDD RRSYDMLGRG ETSGVFQLES TGMRDVLRNM KPDTLEDIVA
IVALYRPGPM DNIPSYIKRK KGEEEVVYLH DSLEPILKET YGILIYQEQV MQAAQIMAGY
SLGGADLLRR AMGKKIKAEM DTQRALFVEG AGKRGTSEAK ASEVFDQIAK FAGYGFNKSH
AAAYGLVAYQ TAYLKANYPV EFMAATMTYD MHNTDKLAVF KGELRRLDIP LLPPDVNRSF
AVFGVEDGAV RYALGAVKNV GAAAMDALVA EREARGPFKD LADFARRLDG KVINKRLLEN
LIKAGALDSL DGDRAKLLAN ADVLMRHAQA AAEDRASNQS SLFGGAGATS EPPMKFRACA
AWTITETLAH ERDAMGFYLS AHPLDIYGDS LERLDVVPIE MLPGHLRGGG SGAVKLAVTP
GARKERIGKS GSRYAFVELS DATGSCETMV FSEVLGASRE LLDSGRPLLV RADARLEGEE
VRLLAQAIEL LDDAVARAAR RIKVSFSDSG PIPRLAEIIR ADGPGNRNIL LVADLGDREV
EFRLDGGFAL RSETLAALRN VPGVGEVREV
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