Gene Rru_A1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1577 
Symbol 
ID3834994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp1858177 
End bp1858806 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content69% 
IMG OID637825669 
ProductThiJ/PfpI 
Protein accessionYP_426664 
Protein GI83592912 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.327807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTCG CGATCCTGCT ATACGACGGG CTGACGCCGC TTGATGCGAT CGGTCCCTTC 
GATGTGCTGG GCAAACTGCC GCGCGCCCGG GTGCGCACGG TGGGTATCGA GCGCGGCAAT 
GTGCATTCGC GCGGGGTCTC GCTGACCCTG CACGCCGATA ACGCCCTGAC CGAGGTCAAC 
GCCCCCGATG TGGTGGTGGT GCCGGGCGGG GCGGGGGCCG ATGAACTGGC CCATGATCCG 
ATGATCCGCG CTTGGTTGCG CAAGGTGGTG CCAACCAGCC GGGCGGTGTT GTCGGTCTCC 
ACCGGATCGC TGATCCTGGC CGGGGCCGGG GTGCTGGAGG GCCGCGAGGC GACCACCCAT 
TGGCGGGCCC TTGACCTGCT GGCCGGGTTT GGCGTGCGCA CCAAGCCCGA ACGCATCGTG 
ACCGATGGCA CGATCACCAC GGCGGCCACG GCCGCCGCCG GCCTCGATGC CTCCTTCCTG 
ATCGCCGAAC GGCTTTGCGG CCGGGCGGTG GCCGAGGCCA TTCAGCTTTT GATCGGCTAT 
GATCCCGAAC CGCCGCTAGC CGCCGGAGAC CTGTTCAAGG CCCCGGCGGA GCGCATCACC 
CTGGCTCGCA CCGGATTGGC CCACCCATGA
 
Protein sequence
MDVAILLYDG LTPLDAIGPF DVLGKLPRAR VRTVGIERGN VHSRGVSLTL HADNALTEVN 
APDVVVVPGG AGADELAHDP MIRAWLRKVV PTSRAVLSVS TGSLILAGAG VLEGREATTH 
WRALDLLAGF GVRTKPERIV TDGTITTAAT AAAGLDASFL IAERLCGRAV AEAIQLLIGY 
DPEPPLAAGD LFKAPAERIT LARTGLAHP