| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1572 |
|---|
| Symbol | |
|---|
| ID | 3834989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1854056 |
|---|
| End bp | 1854460 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637825664 |
|---|
| Product | methylmalonyl-CoA epimerase |
|---|
| Protein accession | YP_426659 |
|---|
| Protein GI | 83592907 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
|---|
| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.99694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAC GTCTTAATCA CGTTGCCATC GCGGTCCCCG ATCTCGAGGC GGCCTGCGCC
GTTTATCGTG ACGCGCTGGG GGCGACCGTT TCGGCGCCGC TGCCCCAGCC CGATCATGGC
GTGACCGTGG TCTTCGTGGA ACTGCCCAAT ACCAAGATCG AACTCCTCCA TCCGCTGGGG
GAGGCCTCGC CGATCGCCGC CTTCCTTAGC AAAAGTCCCG CCGGCGGCAT CCATCACATC
TGCTACGAGG TCGAGGATAT CCTGGCCGCC CGCGACCATA TGAAGGCCGA GGGCAAGCGG
GTTCTTGGCG ATGGCGAGCC GCGCCTTGGC GCCCATGGCA AGCCGGTGCT GTTCCTTCAT
CCCAAGGACT TCAACGGCAC GCTGGTTGAA CTCGAGCAGG CCTGA
|
|---|
| Protein sequence | MIGRLNHVAI AVPDLEAACA VYRDALGATV SAPLPQPDHG VTVVFVELPN TKIELLHPLG
EASPIAAFLS KSPAGGIHHI CYEVEDILAA RDHMKAEGKR VLGDGEPRLG AHGKPVLFLH
PKDFNGTLVE LEQA
|
|---|
| |