Gene Rru_A1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1557 
Symbol 
ID3834974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp1837151 
End bp1837792 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content63% 
IMG OID637825649 
ProductNADH dehydrogenase subunit C 
Protein accessionYP_426644 
Protein GI83592892 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGTG TTTTCGAAGA ACGGGTCGAG AGCCTCAAGG AACTTGGGGC CCGCATCGAA 
GCCGCCCTGC CGACCGACGT GGTCCGCGTC GAGATGGCCA AGGACGAGCT TCAGGTGATC 
GCCCAGCGGC CATCGATCGC CAAGGTCCTG ACGTTCCTGC GCGATGACAG CGCCTGTCGC 
TTCAGTCAGC TGGTCGATAT CGCCGGCGTC GACTACCCCA GCCGCGAAGA GCGGTTCGAG 
GTGGTCTATA ACATGCTGTC GATGCACCAT AATCAGCGGA TCCGGGTGAA GATCTCGGCA 
AGCGAGGACA CCCCCGTTCC GTCGGTGACC CGGGTGTTCT CCTCGGCTAA TTGGTTCGAG 
CGCGAAGCCT GGGACATGTA CGGGATCTTC TTTTCCGAGC ATCCCGACCT GCGGCGGCTG 
TTGTCGGACT ACGGCTTTGA GGGCCATGCC CAGCGCAAGG ACTTCCCGCT GACCGGCTAT 
AAAGAGGTGC GCTACGACGA GGAGCTCAAG CGGGTGGTCT ACGAGCCCGT GCGCCTGAGC 
CAGGATTTCC GCACCTTCGA TTTCCTCAGC CCCTGGGAGG GGATGGACCG CCAGATCCGG 
CGGGTGCTGC CCGGCGACGA GAAGGCCGAG GGGAACGCGT GA
 
Protein sequence
MTSVFEERVE SLKELGARIE AALPTDVVRV EMAKDELQVI AQRPSIAKVL TFLRDDSACR 
FSQLVDIAGV DYPSREERFE VVYNMLSMHH NQRIRVKISA SEDTPVPSVT RVFSSANWFE 
REAWDMYGIF FSEHPDLRRL LSDYGFEGHA QRKDFPLTGY KEVRYDEELK RVVYEPVRLS 
QDFRTFDFLS PWEGMDRQIR RVLPGDEKAE GNA