| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1551 |
|---|
| Symbol | clpX |
|---|
| ID | 3834967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1828668 |
|---|
| End bp | 1829936 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637825642 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_426638 |
|---|
| Protein GI | 83592886 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGT CTTCAGGCGG TGATTCGAAG AACACCCTCT ACTGCTCATT CTGCGGAAAG
AGCCAGCATG AGGTCCGTAA GCTCATCGCC GGACCGACGG TGTTCATCTG CGACGAATGC
GTCGAACTGT GCATGGACAT CATCCGCGAG GAGCACAAGA CCAGTCTGGT GAAGTCCCGC
GACGGGGTTC CCTCGCCTAA GGACATCCTC AAGGTTCTCG ATGATTATGT GATCGGCCAG
CAGCACGCCA AAAAGGTGCT GTCCGTCGCC GTCCACAATC ACTACAAACG GCTGTCCCAG
GCCGGCAAGA ACAGCGACGT GGAACTGGCG AAGTCGAACA TCTTGCTGAT CGGTCCGACC
GGTTGCGGCA AGACCCTGCT CGCCCAGACC CTGGCGCGCA TTCTCGACGT GCCCTTCACC
ATGGCCGACG CCACGACGCT GACCGAGGCC GGCTATGTCG GCGAGGATGT GGAGAACATC
ATCCTCAAGC TGCTTCAGGC CTCGGATTAC AACGTCGAAC GCGCCCAGCG CGGCATCGTC
TATATCGACG AGATCGACAA GATCAGCCGC AAGTCCGACA ACCCGTCGAT CACCCGCGAC
GTGTCGGGCG AGGGCGTGCA GCAGGCCCTG CTCAAGATCA TGGAGGGCAC CGTCGCCTCG
GTGCCGCCCC AGGGCGGGCG CAAGCATCCC CAGCAGGAAT TCCTGCAGGT CGACACCACC
AATATCTTGT TCATCTGCGG CGGCGCCTTC GCCGGCCTTG ATCGCATCAT CTCGGCGCGG
GGCAAGGGGT CGTCGATCGG CTTTGGCGCC GATGTCCGCG ATCCCGAAGC CCGGCGCACC
GGCGAGGTTC TGCGCGCCGT CGAGCCCGAG GATCTGCTGA AATACGGCCT GATCCCCGAA
TTCGTCGGCC GTCTGCCGGT TCTGGCGACC CTGGACGATC TGGACGAAGA CGCCCTGGTC
GATATCTTGA CCACGCCTAA GAACGCCCTG GTCAAGCAGT ATCAGCGCCT GTTCGAGATG
GAGAGCACCC AGCTTTCCTT CAAGGAAGAC GCGCTGCGCT GCATCGCGCT GAAGGCCATC
GCCCGCAAGA CCGGCGCCCG CGGCCTGCGC TCGATCATGG AGGGCATCTT GCTTGACACC
ATGTTCGATC TGCCGGGCAT GGAAGGCGTC GAGGAGGTGG TGGTCAACAA GGAGGTGGTC
GAAGGCCGGG CCAAGCCTTT GTTCATCTAT TCCGACCAGC GCACCTCGGC CGACGGCGCC
AGCGCCTGA
|
|---|
| Protein sequence | MSKSSGGDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE EHKTSLVKSR
DGVPSPKDIL KVLDDYVIGQ QHAKKVLSVA VHNHYKRLSQ AGKNSDVELA KSNILLIGPT
GCGKTLLAQT LARILDVPFT MADATTLTEA GYVGEDVENI ILKLLQASDY NVERAQRGIV
YIDEIDKISR KSDNPSITRD VSGEGVQQAL LKIMEGTVAS VPPQGGRKHP QQEFLQVDTT
NILFICGGAF AGLDRIISAR GKGSSIGFGA DVRDPEARRT GEVLRAVEPE DLLKYGLIPE
FVGRLPVLAT LDDLDEDALV DILTTPKNAL VKQYQRLFEM ESTQLSFKED ALRCIALKAI
ARKTGARGLR SIMEGILLDT MFDLPGMEGV EEVVVNKEVV EGRAKPLFIY SDQRTSADGA
SA
|
|---|
| |