| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1541 |
|---|
| Symbol | |
|---|
| ID | 3834956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1814272 |
|---|
| End bp | 1815615 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637825631 |
|---|
| Product | beta alanine--pyruvate transaminase |
|---|
| Protein accession | YP_426628 |
|---|
| Protein GI | 83592876 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0541648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATT TCGATCCGGC CCTGGCCGGT GGCCTGAGCC GCGCCGAGCT TGAGGCCCAT
TGGATGCCGT TTACCGCCAA CCGCGAGTTC AAGGCCAATC CGCGCATGGT CGTTGGCGCC
GAGGGGGTGC ATTACATCGA TGCCCGTGGC CGCAAGCTTT ATGACAGCCT GTCGGGCCTG
TGGTGCTGCG GCGCCGGTCA TGGGCGGCGC GAGATCATTG AGGCGGTGAG CGCCCAGATC
GCCGCGCTTG ATTACGCGCC GGCCTTCCAG TTCGGTCATC CCAGCTCGTT CAAACTAGCC
AATAAGGTGG CGTCGCTGAC CCCGAAGGGG CTCGATCATG TCTTTTTCAC CAATTCCGGG
TCGGAATCGG TCGATACGGC GCTGAAGATG GCGCGGGCCT ATTGGCGGCT GAAGGGCGAG
CCGGCGCGGA CCAAGCTGAT CGGCCGGGCC AAGGGCTATC ACGGGGTGAA CTTCGGCGGT
CTGGGCGTTG GCGGCATCGG CGGCAATCGC AAGCTGTTTG GCGTCGGCAT CGATGCCGAT
CATCTGCCCC ATACCATGCT GCCCGAAAAC GCCTTCACCA AGGGCTGTCC CGAGACCGGC
GCCGAGCTGG CCGATGCCCT GGAGGATCTG GTGGCGCTCC ATGACGCCTC CAATATCGCC
GCGGTGATCG TCGAACCTTT GGCCGGATCG ACCGGGGTAC TGCCGCCGCC CAAGGGCTAT
CTGCAACGCC TGCGCGCCAT CTGCGACAAA TACGGCATCT TGCTGATTTT CGACGAGGTC
ATCACCGGCT TTGGCCGCAT GGGCGCGGCC TTCGGCGCCG ACGCCTTCGG CGTGGTTCCC
GATATCATGA CCATCGCCAA GGGGCTGACC AACGGCGCGG TGCCGATGGG CGCCGTGGTC
GCCAGCGGCG AGATCTATCG GACCTTCATG GAAAACTCCG GCCCCGATCA TCTGGTGGAG
TTTCCCCACG GCTATACCTA TTCGGCCCAT CCGGTGGCCT GCGCCGCCGG CCTCGCCGCG
CTTGAGATCT TTGAAAAGGA CCAATTGGCC GCCCGGGCGG CGGCGCTGGC GCCCTATTTC
GAAAACAGCC TGCATGGCCT GCGCGGCCTC AAGCACATCG TCGATATCCG CAATTATGGT
TTGGCCGGGG CGGTGCAGAT CGAAAACGCC CCCGGTCAGC CGGCCAAAAG ACCCCTGGAG
ATCGGCCGCA AATGTTGGGA GGCGGGCTAT TACGTGCGCT TTGGCGGCGA CAGCCTGCAA
TTCGGCCTGC CGTTCTTCAG CGAACCCGCG CAGATCGACG GCCTGATGAA CGCCGTCGCC
GATGCCGTTT CCTCTGTCGC CTGA
|
|---|
| Protein sequence | MSDFDPALAG GLSRAELEAH WMPFTANREF KANPRMVVGA EGVHYIDARG RKLYDSLSGL
WCCGAGHGRR EIIEAVSAQI AALDYAPAFQ FGHPSSFKLA NKVASLTPKG LDHVFFTNSG
SESVDTALKM ARAYWRLKGE PARTKLIGRA KGYHGVNFGG LGVGGIGGNR KLFGVGIDAD
HLPHTMLPEN AFTKGCPETG AELADALEDL VALHDASNIA AVIVEPLAGS TGVLPPPKGY
LQRLRAICDK YGILLIFDEV ITGFGRMGAA FGADAFGVVP DIMTIAKGLT NGAVPMGAVV
ASGEIYRTFM ENSGPDHLVE FPHGYTYSAH PVACAAGLAA LEIFEKDQLA ARAAALAPYF
ENSLHGLRGL KHIVDIRNYG LAGAVQIENA PGQPAKRPLE IGRKCWEAGY YVRFGGDSLQ
FGLPFFSEPA QIDGLMNAVA DAVSSVA
|
|---|
| |