| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1531 |
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| Symbol | |
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| ID | 3834946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1801638 |
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| End bp | 1805186 |
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| Gene Length | 3549 bp |
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| Protein Length | 1182 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637825621 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_426618 |
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| Protein GI | 83592866 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTT TTCTCGACCA CCTGCGCAAT CGGGTCTTGC TGTGCGACGG CGGCATGGGA
AGTTTGGTCC AGGCCATGGA CCTGTCGGTG GACGGCGACT TCATGGGGCG GGAGAACTGC
ACCGAGGTTC TGAACCTGTC GCGTCCCGAT GTGGTCCGCG ACATCCATAC CCGTTATTTT
GCCGCCGGCG CCGATTGCGT CGAGACCAAC ACCTTCGGCG GATCGACGCT GACCCTGGCC
GAATTCGACT TGGCCGATCG CACCCGCGAG ATCAATCGCC GGGCCGCCGA GATCGCCCGC
GAGGCCGCCG AAAGCTTCGC CGATGGCCGT GACCGCTTCG TTCTGGGTTC GATCGGCCCG
GGCACCAAGC TGCCAAGCCT CGGCCATATC GATTACGACA CCCTGAAGGA CGCCATCACC
GTTCAATGCG AGGGGCTGAT CGAAGGTGGC GCCGACGCCA TTCTGGTCGA GACCTGCCAG
GATCCTTTGC AGTTCAAGGC GGCGATCAAT GCCGCCAAGG CGGCGCGGTT GGCCCTGGGC
AGCGATACGG CGATCTTGTT GCAGGTCACC GTCGAAACCA CGGGAACCCT GCTGGTCGGC
GCCGATATCG CCGCCGCCGC CACGGTGGCC CACGCCCTGG GCGTTGACAG CCTGGGGCTG
AACTGCGCCA CCGGCCCCCA GGAAATGAGC GAGCATGTGC GCTGGCTCAA GGAGAACTGG
CCGGGGCTGA TCAGCCTGCA GCCCAATGCC GGTTTGCCCG AATTGCTCGA CGGCAAGACC
CATTACCCGC TGACTCCGGC GGAACTGGCC GATTGGCATG GCCGCTTCAT CCGCGAGGAC
GGGGTCAATC TGATCGGCGG CTGCTGCGGC ACGACGCCCG ATCACATCGC CGCCGTCAAC
GCCATGCTCG AAACCCTGGG CCAGGGCCGG CGGCCGGCGC CGGTCAAGCG ATCGGTCCAT
TGGGTGCCCT CGGTCGCCTC GCTCTATGGG GCGGTGCCGA TGCGCCAGGA GAACGCCTTT
CTGTCGATCG GCGAGCGCTG CAACGCCAAT GGCTCGAAGA AATTCCGCAC CTTCCAGGAT
AACGAGGACT GGGACGCCAT CGTCGGCATG GCCCGCGAGC AGGTCAAGGA GGGTAGCCAT
ACCCTGGATG TCTGCACCGC CTTCGTCGGC CGCAAGGAAG GGGCCGATAT GACCGAGGTG
GTCAGCCGCC TGCGCGGCGG GGTCAACGCG CCGCTGGTGA TCGACAGCAC CGAGACCCCG
GTGCTGACCC AGGCGCTGAA GCTTTACGGC GGCAAGGCGA TCATCAATTC CATCAACTTC
GAAGATGGCG AGGAAAGTGC GGCGCAGCGC CTTGCCCTGG CCCGCGAGTT CGGCGCCGCC
GTCATCGCCC TGACCATCGA CGAAGAGGGC ATGGCCAAGG ATGCCGAGGC CAAGCTGCGC
ATCGCCCACC GGCTTTATGA CTTCGCCGTC ACCCAGCACG GCCTGCCGGC CAGCGACCTG
ATGTTCGATC CGCTGACCTT CACCATCTGC ACCGGCAATA CGGACGACCG CCGGCTGGGC
CTGGAAACCC TCGACGCCAT CCGCCGCATC CGCACGGAGC TGCCCGAGTG CCAGATCATC
CTCGGGCTGT CGAATATCTC CTTCGGGCTG AAGCCGGTCG CCCGCCATGT GCTGAACTCG
GTGTTCCTTG ACAAGGCGGT CGAGGCCGGG ATGACCGGGG CGATCGTTCA TATCTCGAAG
ATCCTGCCGC TGCACAAGAT TCCCGCCGAC GAGGTCAAGG CGGCCGAGGA TCTGATCTTT
GACCGCCGGG CGCCCGGCTA TGATCCGCTG CACGCCTTCA TCGCCCTGTT CGAGGACCGC
TCGGAAACCA AGGTGGCGGT CAAGCGCGCC GAGACCGTGG AAGAGCGCCT GAAACAGCGC
ATCGTCGATG GCGACCGCCT GGGCCTTGAT GCCGATCTGA CCGAGGCGAT GGGCAAATAT
CCGCCGCTCG AGATCATCAA TTCGCTGCTG CTTGACGGCA TGAAGGTGGT CGGCGAGCTG
TTTGGCGCGG GCAAGATGCA GTTGCCCTTC GTCTTGCAAT CGGCCGAGAC GATGAAGGCG
GCGGTCGCCT TCCTCGAGCC GCATATGGAA AAGATCGAGG GCCAGGAAAA GGGCATCATC
GTTCTGGCCA CCGTGAAGGG CGACGTTCAC GACATCGGCA AGAATCTGGT CGATATCATC
CTGTCCAACA ACGGCTATAA GGTCATCAAC ATCGGCATCA AGCAGCCGAT CGCCGCCATC
TTGGCCTCGG CCCGGGAAAA CCGCGCCGAC GCCATCGGCA TGTCGGGGCT GCTGGTCAAA
TCGACCGTCA TCATGAAGGA CAATCTGGAG GAGATGGCCC GCGAGGGTTG GAATACGCCG
GTGCTGCTGG GCGGCGCCGC CCTGACCCGG GCCTTTGTCG AGGAGGATTG CGTCAGCGCC
TATGCCGGCA GTGGCCGGGT GGCCTATGCC CGCGACGCCT TCGACGGCCT CGACCTGATG
GCTAAGGTGG CCGAGGGGCG CTTTGATACG CATCTGAGCG CGGTTCAGCA AAAACGCGCC
GGCCGGCCCT CGCGCCGGCC CAAGGCGCCG CCGCTGTGGC CGGCCAATGA TCCGTCCTCC
AAAATCGCCC CGCGAACCTT GGACGATCAG GACACCGCCA TCCACAAGAT CTCCGAACGT
CCGGTCGACG CCGAAGAGAT CTTGCTGCGC CGGGCCGAAC TGGCCCGCGA CCATGTGGTG
CCGACGCCGC CCTTCTGGGG GGCCAAGGTG CTGGAATCGA TCTCGCTGAA ATCGCTGGTG
CCCTATATCA ACGAAGCCAC GCTGTTCCAA TTCCAATGGG GCTTCCGCAA GGGCGGGCGG
ACGCGCGAGG AATGGAAGGA CTGGGCGGCC AGCGAGATCC GGCCGATCAT GTTCGACATG
CTCAAGACCT GCGCCCAGGA GGAAATCCTC AAGCCGCGCG CCGTCTACGG CTTCTGGAAG
GCGGCCAGCC AGGGTGACGC CATCGTGCTG TTCGCCGAGG ATGGAACCAC CGAGGTCGGG
CGCTTCGATC TGCCGCGCCA GACCATTGAG GGCGGCATTT GCCTTGCCGA TTTCGTGCGC
GATATCGACA GCGGCGAGCG CGATGTCATC GCCTTGCAGG CGGTGACGGT GGGGGCGCGG
GCCAGCGATG TCTGCCGCGA TTGGTTCGCC GCCAATCGCT ACAAGGATTA CCTCTACCTC
CACGGCATTT CGGTCGAGGT GGCGGAGGCC ATGGCCGAAT ATGTGCACAA ACGCATCCGC
GCCGAACTGG GCTTCGCCGC CGAGGAGGCC CGCGATATCG AGCGGATGAT CAAACAGGAA
TACCGGGGCT CGCGCTATTC CTTCGGCTAT CCGGCCTGCC CCAATCTGGG CGATCAGCGC
CAGTTGCTTG ATCTTCTGGG CGCCGAGCGC ATCGAGCTCG ACCTGTCGGA CGAAGACGAA
CTGGTGCCCG AGCAATCAAC CTCGGCCCTT GTCCTGCTCC ATCCCCAGGC CAAGTATTTC
CGCATTTGA
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| Protein sequence | MSRFLDHLRN RVLLCDGGMG SLVQAMDLSV DGDFMGRENC TEVLNLSRPD VVRDIHTRYF
AAGADCVETN TFGGSTLTLA EFDLADRTRE INRRAAEIAR EAAESFADGR DRFVLGSIGP
GTKLPSLGHI DYDTLKDAIT VQCEGLIEGG ADAILVETCQ DPLQFKAAIN AAKAARLALG
SDTAILLQVT VETTGTLLVG ADIAAAATVA HALGVDSLGL NCATGPQEMS EHVRWLKENW
PGLISLQPNA GLPELLDGKT HYPLTPAELA DWHGRFIRED GVNLIGGCCG TTPDHIAAVN
AMLETLGQGR RPAPVKRSVH WVPSVASLYG AVPMRQENAF LSIGERCNAN GSKKFRTFQD
NEDWDAIVGM AREQVKEGSH TLDVCTAFVG RKEGADMTEV VSRLRGGVNA PLVIDSTETP
VLTQALKLYG GKAIINSINF EDGEESAAQR LALAREFGAA VIALTIDEEG MAKDAEAKLR
IAHRLYDFAV TQHGLPASDL MFDPLTFTIC TGNTDDRRLG LETLDAIRRI RTELPECQII
LGLSNISFGL KPVARHVLNS VFLDKAVEAG MTGAIVHISK ILPLHKIPAD EVKAAEDLIF
DRRAPGYDPL HAFIALFEDR SETKVAVKRA ETVEERLKQR IVDGDRLGLD ADLTEAMGKY
PPLEIINSLL LDGMKVVGEL FGAGKMQLPF VLQSAETMKA AVAFLEPHME KIEGQEKGII
VLATVKGDVH DIGKNLVDII LSNNGYKVIN IGIKQPIAAI LASARENRAD AIGMSGLLVK
STVIMKDNLE EMAREGWNTP VLLGGAALTR AFVEEDCVSA YAGSGRVAYA RDAFDGLDLM
AKVAEGRFDT HLSAVQQKRA GRPSRRPKAP PLWPANDPSS KIAPRTLDDQ DTAIHKISER
PVDAEEILLR RAELARDHVV PTPPFWGAKV LESISLKSLV PYINEATLFQ FQWGFRKGGR
TREEWKDWAA SEIRPIMFDM LKTCAQEEIL KPRAVYGFWK AASQGDAIVL FAEDGTTEVG
RFDLPRQTIE GGICLADFVR DIDSGERDVI ALQAVTVGAR ASDVCRDWFA ANRYKDYLYL
HGISVEVAEA MAEYVHKRIR AELGFAAEEA RDIERMIKQE YRGSRYSFGY PACPNLGDQR
QLLDLLGAER IELDLSDEDE LVPEQSTSAL VLLHPQAKYF RI
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