| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1527 |
|---|
| Symbol | |
|---|
| ID | 3834942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1796981 |
|---|
| End bp | 1798660 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637825617 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_426614 |
|---|
| Protein GI | 83592862 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCCT ATCAGTATGT CTATGTGATG AAGAACCTGA GCAAGGTCTA TCCCGGCGGG
AAGGAGATCT TGAAGGGGCT TTCGCTCTCG TTCTTGCCCG GGGCCAAGAT CGGCGTGCTC
GGTCCCAACG GGGCGGGCAA GTCCACCGTT CTGCGCATCA TGGCCGGCAT CGACAAGGAG
TTCGGCGGCG AGGCCTGGGC CGCCGATGGC GTGAAGATCG GCTATCTGGC CCAGGAGCCC
GATCTCGATC CGGCCAAGGA CGTGATGGGC AACGTGATGG ACGGCGTCGG CCCGATGAAG
GCCCTGCTCG ATCGCTTCGA AGAGGTCAGC GCCAAGTTCG GCGAAGTCGT CGATGACGAC
GAGATGAACG CCCTGATCGC CGAACAGGCC GAAATCCAGG AAAAGATCGA CGCCGCCGAC
GGCTGGGACC TGCAGCGTCA GGTCGAAATC GCCATGGACG CCCTGCGCTG CCCGCCCGGC
GAGGCGGATG TGACCAAGCT GTCGGGCGGT GAACGCCGCC GGGTGGCCCT CTGCCGCCTG
CTGCTGTCCA AGCCCGACAT GCTGCTGCTT GACGAACCGA CCAACCATCT GGACGCGGAA
TCGGTGGGCT GGCTGGAACA CTTCCTTCAG CAATATCCGG GCACCGTCGT GGCGATCACC
CATGATCGCT ACTTCCTGGA CAATGCCGCC AATTGGATCT TGGAAGTCGA CCGCGGGCGC
GGCATTCCCT ATGAGGGGAA TTATTCGACC TATCTGGAGA ACAAGCAAAA GCGCCTGGAG
CAGGAATCCC GCGAGGAGGG GGCGCGCGAC AAGACCATTT CGCGCGAACT GGAATGGATC
CGCCAGTCGC CCAAGGCCCG TCAGGCCAAA AGCAAGGCGC GTATCACCGC TTATGAAAAC
CTGGTGGCCT CGGCCGGAAG CCAGAAGGTG GAAAGCGCCC AGATCGTCAT TCCCATCGCC
GAACGCCTGG GCGGCGTGGT GATCGAGGCC GAAGGGCTGA CCAAGGGCTT TGGCGACCGT
CTGCTGATCG ACGATCTGAC CTTCCGCCTG CCGCCGGGCG GCATCGTCGG CGTCATCGGC
GCCAATGGCG CGGGCAAGAC GACGCTGTTC AAGATGATCA CCGGCAAGGA CCAGCCCGAC
AGCGGCGCCA TCCGCATCGG CGAAACGGTG CGCCTGGGCT ATGTCGACCA GAGCCGCGAC
GCCCTCGACC CCAACAAGAC CGTGTGGCAG GAAATCTCCG ACGGTCAGGA CGAGCTGGAT
CTGGGCAAGC GCAAGATCCC CAGCCGCGCC TATGTCGGCC AGTTCAACTT CAAGGGCAGC
GATCAGCAAA AGAAGGTCGG TCAGCTCTCA GGGGGCGAGC GCAACCGGGT GCATCTGGCC
AAGATGCTGA AGTCGCATGC CAATGTGCTG CTGCTTGACG AACCGACCAA CGACCTGGAC
GTCGAGACCC TGCGCGCCCT GGAAGACGCC CTGCTGGAAT TCGCCGGCTG CGCCGTGGTC
ATCTCCCATG ATCGCTGGTT CCTTGACCGC ATCGCCACCC ACATCCTGTC CTTCGAGGGC
GACTCCCATG TGGAATGGTT CGAGGGCAAC TTCGAGGCTT ACGAGGCCGA CAAGAAGCGC
CGCCTGGGCG CCGACGCCGA CCAGCCCCAT CGCCTGAAGT ACAAGCCTCT CAGCCGCTAA
|
|---|
| Protein sequence | MASYQYVYVM KNLSKVYPGG KEILKGLSLS FLPGAKIGVL GPNGAGKSTV LRIMAGIDKE
FGGEAWAADG VKIGYLAQEP DLDPAKDVMG NVMDGVGPMK ALLDRFEEVS AKFGEVVDDD
EMNALIAEQA EIQEKIDAAD GWDLQRQVEI AMDALRCPPG EADVTKLSGG ERRRVALCRL
LLSKPDMLLL DEPTNHLDAE SVGWLEHFLQ QYPGTVVAIT HDRYFLDNAA NWILEVDRGR
GIPYEGNYST YLENKQKRLE QESREEGARD KTISRELEWI RQSPKARQAK SKARITAYEN
LVASAGSQKV ESAQIVIPIA ERLGGVVIEA EGLTKGFGDR LLIDDLTFRL PPGGIVGVIG
ANGAGKTTLF KMITGKDQPD SGAIRIGETV RLGYVDQSRD ALDPNKTVWQ EISDGQDELD
LGKRKIPSRA YVGQFNFKGS DQQKKVGQLS GGERNRVHLA KMLKSHANVL LLDEPTNDLD
VETLRALEDA LLEFAGCAVV ISHDRWFLDR IATHILSFEG DSHVEWFEGN FEAYEADKKR
RLGADADQPH RLKYKPLSR
|
|---|
| |