Gene Rru_A1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1525 
Symbol 
ID3834940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp1795332 
End bp1795964 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID637825615 
Productnucleoside diphosphate pyrophosphatase 
Protein accessionYP_426612 
Protein GI83592860 
COG category 
COG ID 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.411844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACCGA CCAAGGTGAG CGTTATCGAG CGGACCGCCG CCTTTCGCGG CTATTTCCAT 
GTCGACCGCG TGCGGTTGCG CCACGAGCTT TATTCGGGGG CGACCGGCCC GGAAATCGTC 
CGCGAGGTGT TCGAGCGCGG TCATGCCGCC GCCGTGCTGC TTTATGACGC CGATGCCGAT 
GTGGTGGTGC TGATTGAACA ATTCCGCCCC GGCCCCTGGG CGGCGGGCGA AGAGCCGTGG 
ATGCTCGAGA TCGTCGCCGG CATCATCGAC GCCGGGGAAA CCGTCGAAGC GGTGGCGCGG 
CGCGAATGCC AGGAGGAATG CGGCCTGATC CCCGACGAGT TGGTGCCGAT CACCCGGGTT 
TTCGTCTCGC CCGGCGTCAT GACCGAAACC GTCGCGCTGT ATTGCGGCCG GGTCGACAGC 
CGCGCCGCCG GCGGCGTTCA TGGGCTGGCC GAGGAAGGCG AGGATATCCG CGTTGTTCCC 
ATGGCCGCCG AGGCCTTCAT CGATCTGGCC CAAAGCGGCG CCCTGACCAA TGCCACCGCC 
GCCCTGGCCG GTTATTGGTT CGCGCTGAAC CGGGCCTCGC TGCGCGCGCG CTGGCGCACC 
GGCGATGTCT CCCCCGGATC CTCGGCGGCC TAA
 
Protein sequence
MRPTKVSVIE RTAAFRGYFH VDRVRLRHEL YSGATGPEIV REVFERGHAA AVLLYDADAD 
VVVLIEQFRP GPWAAGEEPW MLEIVAGIID AGETVEAVAR RECQEECGLI PDELVPITRV 
FVSPGVMTET VALYCGRVDS RAAGGVHGLA EEGEDIRVVP MAAEAFIDLA QSGALTNATA 
ALAGYWFALN RASLRARWRT GDVSPGSSAA