| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1507 |
|---|
| Symbol | |
|---|
| ID | 3834922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 1780803 |
|---|
| End bp | 1781570 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637825597 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_426595 |
|---|
| Protein GI | 83592843 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.444133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGG GCGACAGCGT GATCCTGATC ACCGGCGGTG GATCGGGTTT GGGGGCGGCC
ACGGCGAGGA TGGTGGTCGA AGGCGGCGGC AAGGCGGTGC TGGTCGATGT CGATGAGGCG
CGGGGCGCCG CCCTGGCCGG GGACCTGGGC CCCAGCGCCC GCTTCGTGGC GGCCGATGTC
ACCGCCGAGG CCGACGGCGA ACGGGCGGTG GCGGCGGCGA TCGGGGCTTT CGGCGCCTTG
CACGGCCTGT GCAATTGCGC CGGCATCGCC CCGGGCGAAA AAGTGCTGGG CCGCGACGGC
CCCCATGGCC TGGACAGCTT CGCCCGGGTC ATCAGCGTCA ATCTGATCGG CACCTTCAAC
ATGATCCGCC TCGCCGCCCA GGCGATGGCG CGAAACGCCG TCAATGCCGA GGGCGAACGC
GGGGTGATCA TCAACACGGC CTCGGCCGCG GCGTTCGATG GGCAGATCGG TCAGGCGGCC
TATGCGGCGT CGAAAGGCGG GGTCGCCGCC CTGACCCTGC CGGTCGCCCG CGAGATGGCC
CGCCACGCCA TCCGGGTGAT GACCATCGCC CCCGGGCTTT TTGAAACGCC GATGCTGCTC
GGCATGGCCG CCGAGGTTCA GCGCGCGCTG GCCGCCAGCG TGCCCTTCCC CCAGCGCCTG
GGCAAGCCGG CGGAATATGC CGCCCTGGTC CGCCACATCC TGGAAAACCC CATGCTCAAC
GGCGAGGTCA TCCGCCTGGA CGGCGCCTTG CGGATGGCCG CCAAATAG
|
|---|
| Protein sequence | MKLGDSVILI TGGGSGLGAA TARMVVEGGG KAVLVDVDEA RGAALAGDLG PSARFVAADV
TAEADGERAV AAAIGAFGAL HGLCNCAGIA PGEKVLGRDG PHGLDSFARV ISVNLIGTFN
MIRLAAQAMA RNAVNAEGER GVIINTASAA AFDGQIGQAA YAASKGGVAA LTLPVAREMA
RHAIRVMTIA PGLFETPMLL GMAAEVQRAL AASVPFPQRL GKPAEYAALV RHILENPMLN
GEVIRLDGAL RMAAK
|
|---|
| |