Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1504 |
Symbol | |
ID | 3834919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1778108 |
End bp | 1778896 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637825594 |
Product | LamB/YcsF family protein |
Protein accession | YP_426592 |
Protein GI | 83592840 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTGC GGGTGAATGT CAATGCCGAT CTGGGGGAGG GCTATGGCGC CTACCGCATC GGCGACGACG CGGCGATGCT CGACATCGTG CGCTCGGCCA ATATCGCTTG CGGCTTCCAT GCCGGGGATC CGCTGGTGAT GGCGCGCACC GTTCATCTGG CGCTGGCGCG CGGCGTCAGC CTGGGCGCCC ATCCCGGCTT CCCCGATCTC CAGGGCTTTG GCCGGCGGCC GATGACGATG AGCCTCGCCG AAATCGAAGC CATGGTCGCC TATCAGATCG GCGCCCTGCA GGCGATCGCC ACGGCGGCCG GCGGAAGGGT CAGCCATGTC AAACCCCACG GCGCCCTCAG CACCATGGCC GCCGTCGATC ACGCCCTGGC CCTGGCCATC GCCAAGGCGA TCAAGGCCGT CGATCCCGGG CTGATCTCGC TGGCCCCGGC GGGTTCGCGG ATGGTCGAGG CCGGGCGGAC CCTGGGTCTG GCGGTGGTCG AAGAGGTTTT CGCCGATCGC AATTACGATG ACGCCGGGGC GCTGCTGCCG CGCTCCCACC CGAGGGCGCT GATCCATGTG CCCGAGGAGG CCGCCGAGCA TGGGCTGCGC ATGCTGACCG AGGGCATCAT TCTTTCGGCC AATGGCCGGG AAATCCCCTG CGCCGCCCGC TCGATCTGCG TTCACGGCGA CGCCCCCGGA GCGGTGGCCC TGGCGGCCTA TCTGCGCTGC TTCCTGGAGG ATCACGATCT GGAGGTCGTG CCTGTGCCCG AGGTGCTTGG CGAGCAAAAC GCCCCCTGA
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Protein sequence | MTLRVNVNAD LGEGYGAYRI GDDAAMLDIV RSANIACGFH AGDPLVMART VHLALARGVS LGAHPGFPDL QGFGRRPMTM SLAEIEAMVA YQIGALQAIA TAAGGRVSHV KPHGALSTMA AVDHALALAI AKAIKAVDPG LISLAPAGSR MVEAGRTLGL AVVEEVFADR NYDDAGALLP RSHPRALIHV PEEAAEHGLR MLTEGIILSA NGREIPCAAR SICVHGDAPG AVALAAYLRC FLEDHDLEVV PVPEVLGEQN AP
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