Gene Rru_A1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1504 
Symbol 
ID3834919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1778108 
End bp1778896 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID637825594 
ProductLamB/YcsF family protein 
Protein accessionYP_426592 
Protein GI83592840 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGC GGGTGAATGT CAATGCCGAT CTGGGGGAGG GCTATGGCGC CTACCGCATC 
GGCGACGACG CGGCGATGCT CGACATCGTG CGCTCGGCCA ATATCGCTTG CGGCTTCCAT
GCCGGGGATC CGCTGGTGAT GGCGCGCACC GTTCATCTGG CGCTGGCGCG CGGCGTCAGC
CTGGGCGCCC ATCCCGGCTT CCCCGATCTC CAGGGCTTTG GCCGGCGGCC GATGACGATG
AGCCTCGCCG AAATCGAAGC CATGGTCGCC TATCAGATCG GCGCCCTGCA GGCGATCGCC
ACGGCGGCCG GCGGAAGGGT CAGCCATGTC AAACCCCACG GCGCCCTCAG CACCATGGCC
GCCGTCGATC ACGCCCTGGC CCTGGCCATC GCCAAGGCGA TCAAGGCCGT CGATCCCGGG
CTGATCTCGC TGGCCCCGGC GGGTTCGCGG ATGGTCGAGG CCGGGCGGAC CCTGGGTCTG
GCGGTGGTCG AAGAGGTTTT CGCCGATCGC AATTACGATG ACGCCGGGGC GCTGCTGCCG
CGCTCCCACC CGAGGGCGCT GATCCATGTG CCCGAGGAGG CCGCCGAGCA TGGGCTGCGC
ATGCTGACCG AGGGCATCAT TCTTTCGGCC AATGGCCGGG AAATCCCCTG CGCCGCCCGC
TCGATCTGCG TTCACGGCGA CGCCCCCGGA GCGGTGGCCC TGGCGGCCTA TCTGCGCTGC
TTCCTGGAGG ATCACGATCT GGAGGTCGTG CCTGTGCCCG AGGTGCTTGG CGAGCAAAAC
GCCCCCTGA
 
Protein sequence
MTLRVNVNAD LGEGYGAYRI GDDAAMLDIV RSANIACGFH AGDPLVMART VHLALARGVS 
LGAHPGFPDL QGFGRRPMTM SLAEIEAMVA YQIGALQAIA TAAGGRVSHV KPHGALSTMA
AVDHALALAI AKAIKAVDPG LISLAPAGSR MVEAGRTLGL AVVEEVFADR NYDDAGALLP
RSHPRALIHV PEEAAEHGLR MLTEGIILSA NGREIPCAAR SICVHGDAPG AVALAAYLRC
FLEDHDLEVV PVPEVLGEQN AP